Gene Nwi_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1841 
Symbol 
ID3674766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2015400 
End bp2016101 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content65% 
IMG OID637713402 
ProductLexA repressor 
Protein accessionYP_318453 
Protein GI75676032 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.924658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACGC GCAAACAGTA CGAACTCCTG CGTTTTATCA ACGAACGGCT GAAGGAGTCC 
GGTGTGCCGC CTTCGTTCGA TGAAATGAAG GACGCGCTCG ACCTGCGCTC GAAGTCCGGC
ATCCATCGCC TGATCACCGC CCTGGAGGAA CGGGGCTTCA TCCGCCGCCT GCCCAACCGC
GCACGCGCCA TTGAAGTCAT CAAGCTGCCG GAACTGGCCG CAAGCGGCGG CGGACGTCGC
GGTTTCACAC CGAGCGTCAT AGAAGGCAAT CTCGGCAAGG TTCGCCGCGG CGGCGGTGGC
GGCGCTGACG AGGCCGAGCG TCCGGTCGCC GTTCCGGTGA TGGGACGGAT CGCAGCCGGC
ACGCCGATCG AGGCGTTGCA GACCTGCAGT CACACAATCA GCCTGCCGCC CGACATGCTC
GGCGCCGGCG AGCACTACGC GCTCGAGGTG CGCGGCGATT CCATGGTCGA TGCCGGCATC
CTCGATGGCG ATATGGCGTT GATCCAGCGT AATCCGACCG CTGACACCGG CGACATCGTC
GTCGCCCTGA TCGACGACGA GGAAGCGACG TTGAAACGCT TCCGCCGCCG CGGCGCTTCG
ATCGCGCTGG AGCCGGCGAA CGCGGCCTAT GAAGTTCGCA TTCTTCCGCC CAACCGCGTC
CAGATCCAGG GCCGGCTGGT CGGCATTTAC CGCAAGTACT AG
 
Protein sequence
MLTRKQYELL RFINERLKES GVPPSFDEMK DALDLRSKSG IHRLITALEE RGFIRRLPNR 
ARAIEVIKLP ELAASGGGRR GFTPSVIEGN LGKVRRGGGG GADEAERPVA VPVMGRIAAG
TPIEALQTCS HTISLPPDML GAGEHYALEV RGDSMVDAGI LDGDMALIQR NPTADTGDIV
VALIDDEEAT LKRFRRRGAS IALEPANAAY EVRILPPNRV QIQGRLVGIY RKY