Gene Nwi_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1831 
Symbol 
ID3674756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2004092 
End bp2004955 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID637713392 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_318443 
Protein GI75676022 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.805901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.440558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCAGC CCGTCTCCGC ATCGCCCGTC GTCTCCGTCG GCTCCGTGAC TTTCGGCCAG 
GACCGGCCGC TGTCGATTAT TGCCGGTCCG TGCCAGATGG AAAGCCGGGC CCACGCGCTC
GAGGTGGCCG GCGCGCTGAA GGACATCGCC GCGAGGTTGA ACGTCGGCCT TGTGTTCAAG
ACGTCTTTCG ACAAGGCCAA CCGCACCAGC GCTTCCGGCG CGCGCGGGAT CGGCCTGAAG
CAGGCGCTGC CGGTTTTCGC GGACATTCGG TCGTCGCTCG GATTGCCGGT GCTGACCGAT
GTTCATGAGG CAGCCCAATG CGCCGAGGTC GCGCAAGTGG TGGATGTGTT GCAGATTCCG
GCGTTCCTGT GCCGGCAGAC CGACCTGTTG CTGGCGGCGG CCGCGACAGG CAAGGTCGTC
AATGTCAAGA AGGGGCAGTT CCTGGCGCCA TGGGACATGG GGAACGTGGT CGCCAAGATC
ACCGGCGGGG GCAACCGCAA TATCCTGGTC ACCGAGCGCG GCGCGTCGTT CGGCTACAAT
ACGCTGGTGT CCGATATGCG CGCGCTGCCG ATCCTTGCGC GCACCACCGG CGCGCCGGTC
ATTTTCGACG CAACCCATTC CGTGCAGCAG CCGGGAGGCA AGGGCGCCTC AACCGGCGGT
GAGCGCGAGT TCGTGCCGGT GCTGGCGCGC GCGGCGGTCG CGGTCGGCGT CGCTGGCGTG
TTCATCGAGA CCCATCCCGA TCCCGATCAT GCGCCGTCGG ATGGCCCGAA CATGGTGCCG
CTGCGCGAGT TCGAGGCACT GGTGCGAAGG CTGATGGCGT TCGATGCTCT GGCGAAGGCG
GCCGACCCGG CCTGCCCGGA ATGA
 
Protein sequence
MNQPVSASPV VSVGSVTFGQ DRPLSIIAGP CQMESRAHAL EVAGALKDIA ARLNVGLVFK 
TSFDKANRTS ASGARGIGLK QALPVFADIR SSLGLPVLTD VHEAAQCAEV AQVVDVLQIP
AFLCRQTDLL LAAAATGKVV NVKKGQFLAP WDMGNVVAKI TGGGNRNILV TERGASFGYN
TLVSDMRALP ILARTTGAPV IFDATHSVQQ PGGKGASTGG EREFVPVLAR AAVAVGVAGV
FIETHPDPDH APSDGPNMVP LREFEALVRR LMAFDALAKA ADPACPE