Gene Nwi_1826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1826 
Symbol 
ID3675868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1999160 
End bp1999732 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content69% 
IMG OID637713387 
Productouter membrane protein 
Protein accessionYP_318438 
Protein GI75676017 
COG category[S] Function unknown 
COG ID[COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.400541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.391918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACCGA CCGGCGAGCG GCTACGCGGC GCCTACAAGG CCAGCGTGTT CTCCGGGCGC 
ATCGAGGCAG GCTGGCGCGT CGAGACAGCA TTGGCGGGCG TGACGCCCTA TGCCGCAGCC
CAGGCTATCA GCTATCGGCT GCCGTCCTAT CTCGAACAGG GCAACGGCGC GATCGACAGC
TTCGCGCTCG GCTATGTGGC GCGCAACGTC TCCGCGCCCC GGAGCGAACT GGGCCTGCGG
CTCGATCGCA CCACGGTGAT GGCTGATGCG CTGCTGACGT GGCGCGGCCG CGCGGCGTGG
GCGCGCAACT TCAACACAGC GCGTGATGTG GCGGCGACGT TCCAGTCGCT GCCGGGCACC
GGATTCCTCG TCAGCGGCGC GGCGATGGCG CCCGATGCCG CGCTGGTGCC GCCGGAGCCG
AAATCAACTG GCGCAACGGC TTCGCGCTTG CCGCGAACTT CGAGGGCGAG TTCTCCGACA
ACTTATCCAG CTACGCCGGC AAGGGAACGC TGCGATACGC GTGGTGAGAA ACTCCGCGCC
GGCGTGTCCC CTCGATTCGA GAGCTGGCCA TAA
 
Protein sequence
MAPTGERLRG AYKASVFSGR IEAGWRVETA LAGVTPYAAA QAISYRLPSY LEQGNGAIDS 
FALGYVARNV SAPRSELGLR LDRTTVMADA LLTWRGRAAW ARNFNTARDV AATFQSLPGT
GFLVSGAAMA PDAALVPPEP KSTGATASRL PRTSRASSPT TYPATPARER CDTRGEKLRA
GVSPRFESWP