Gene Nwi_1814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1814 
Symbol 
ID3675856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1987495 
End bp1988460 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content62% 
IMG OID637713376 
ProductOmpA/MotB 
Protein accessionYP_318427 
Protein GI75676006 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0898802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACCT TCCTGATGTC TCTTGGTGTG GTTCTGGTCG CGGCGTCCGT GCAGGCGGCG 
GACATCAAGG GGTCCAAGGA CCATCCATTG TTGCCGCGTT ATGACGGCTC GGAGATCCTT
CGTTACAAGC AGGAGGCGTT CACCGATTAC AAACTCGCGA CCGCGCTGAT AAAGAACTAC
GGCGGCAAGG ACAAGAACGC GAATTCCGTG ACTCCGCTGG AGGGCAAGTT CACCCAGATC
GCCTACAAGA TGCCGGAAGG CCGCTCGTCG CTGGAGGTGT TTCGCAACTA CGAGCAGGCG
CTCAAGAAGG CTGGCTTCGA GACGATGTTC AGTTGCGAGC GTGAGACCTG CGGTGGCCGG
AATTTCAGCC TCGCGATCGC CGGCGACCCG CTCTACATGC TGTTCGGCGA TCAGCAGGCC
GACCAGCGCT ACGTCGCCGC GCGGCTCAAG CGCGCGGAAG GCGACGTCTA TGCCTCGCTG
TATGTGATCA TGCACCGCTC GGGTGGCGGG CCGCTCAAGG ACCGTGCGCT GGCGCTTCTC
GAAATCACCG AAGCCAAGCC AATGGAAGAG CGGATGGTCG TGGTGGAGTC GTCCGCCATG
CAGCGTGATA TCGCTTCGCA AGGGCGTGTC GCGATTCACG GCATCCTGTT CGACTTCGAC
AAGGACACCA TGCGTTCCGA CTCGAAGCCG CAGCTCGACG AGATCGCCAA ACTCTTGAAA
GCTCAACCCG AGTTGAAGGT GCTGATCGTG GGGCATACTG ATTCAAAGGG CGCGCTCGAC
TACAACCGCG ACCTGTCGTA TCGCCGCGCG CGTTCTATCG TGGAGTCGCT CAGCCGCGAG
CATGGCGTCG CCGCGGCGCG CCTGACGCCG CTTGGAGTCG GCATGGCTGC TCCGATGGCG
ACCAACCGCA CCGAAGAGGG GCGTGCGCTG AACCGGCGTG TCGAACTGGT CGACGCCACG
AATTGA
 
Protein sequence
MRTFLMSLGV VLVAASVQAA DIKGSKDHPL LPRYDGSEIL RYKQEAFTDY KLATALIKNY 
GGKDKNANSV TPLEGKFTQI AYKMPEGRSS LEVFRNYEQA LKKAGFETMF SCERETCGGR
NFSLAIAGDP LYMLFGDQQA DQRYVAARLK RAEGDVYASL YVIMHRSGGG PLKDRALALL
EITEAKPMEE RMVVVESSAM QRDIASQGRV AIHGILFDFD KDTMRSDSKP QLDEIAKLLK
AQPELKVLIV GHTDSKGALD YNRDLSYRRA RSIVESLSRE HGVAAARLTP LGVGMAAPMA
TNRTEEGRAL NRRVELVDAT N