Gene Nwi_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1772 
Symbol 
ID3675652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1942544 
End bp1943905 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content67% 
IMG OID637713332 
Productpeptidase M23B 
Protein accessionYP_318385 
Protein GI75675964 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.306427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00457712 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCCCGTG TCGTCGAGTT GCTTTGCTCG CGCCGCGTAC CGCAGGTAGC GGTGCTGGCG 
CTGGTGTCGA TCGGTTTTGC CGGGTGCAGC GCGGATATGT CGACGCGCCT CGCGCAGTTG
GACAGCGGTC CGCAGCAATC AAATCGCTTT GGCTGGCAGC GAGAGACCAC CGGCACGGTG
GCCGCGGCGC CTGCGGCTCC GGTGGAGCGC CGCGAGTTGC ACCAATATTC GCGGCCCCCG
TATCGGCCCC ACTCCGACTA TCAATCCCAG CCGCTTCCGC CGATCTCGAC GCCGAAGTCC
TATCCGGTGG CATCGAGCGT GTCGGTGAGC GGGCGCGGTC CCGGTTCATA TACGCCTCCC
GCGCGTGCGA TCGAGTCTGC CCCCGCTGTC GCGGCGCGGG ACGGCTGGAA TCATAAGGGC
GGCACGCCGA TCATTGTCGG GACCAGCGAT ACGCTGGAAG GACTGTCGCG CCGGTATGGC
GTGTCCAGCG CTGAAATTCT CAAGGCCAAT GGCTACCGGG GTCCTCGCCA GTTGCAGCCC
GGCCAGCGGC TGATCATTCC GAAGCGCGCA GCGGTGGCGG AAACCCAGCC GGCTCCGGCC
GCGAAGCCGG CGGTCGTCGC TACGGCTGCG TCCGGCGCCA CCCATCACGT CAATCGCGGC
GACACGCTGA TGAACATCGC CCGCCGCAAT CACATTTCTG TCGGGGAACT TGCACGCGCG
AACGGATTAC CACCGAGCGC GAAGCTGAAG ATCGGCACCA GGATCACGGT GCCGACCAAG
GTCGCCGCGG TGTCCGCGCA ACCTGTCGCC GCTCCGGCCG CGCCTCCCGC CGTTGCACCC
AAGCCCGCGC CCGCACCCGT GGTTCACGCC GCCGCCGCGA CCGCAGGTCC GGTTCAGAAG
GTCAACCTTG CGGCTGCGAC CGCGACGCCT GAAGCGGCCG TGGTTAAACC TTCGGTGAAA
GCCGCGGAGG CGACCGGCGC TTTGCCGACT TTCCGCTGGC CTGTGCGTGG CCGCGTGATC
ACGGCCTATG GCGCCCGGAC CAACGGGAAA TCCAATGACG GCATCAATGT CGCAGTGCCC
GAGGGTACGC CGGTCAAGGC CGCCGAGGAC GGAGTCGTTG CTTATGCCGG CAACGAACTT
AAAGGCTACG GCAATCTGGT CCTGGTTCGG CACTCCAACG GCTACGTGAC CGCCTATGCC
CATGCGCGTG AATTGATGGT GAAGCGCGGA GATTCCATCA GGCGCGGCCA GGTCATCGCC
AAGTCGGGCC AGTCCGGCGA GGCGGGGTCG CCGCAGCTTC ACTTCGAGAT CCGAAAAGGA
TCGACGCCGG TCGACCCGTT GAACTTCCTG AACGGCGCAT GA
 
Protein sequence
MSRVVELLCS RRVPQVAVLA LVSIGFAGCS ADMSTRLAQL DSGPQQSNRF GWQRETTGTV 
AAAPAAPVER RELHQYSRPP YRPHSDYQSQ PLPPISTPKS YPVASSVSVS GRGPGSYTPP
ARAIESAPAV AARDGWNHKG GTPIIVGTSD TLEGLSRRYG VSSAEILKAN GYRGPRQLQP
GQRLIIPKRA AVAETQPAPA AKPAVVATAA SGATHHVNRG DTLMNIARRN HISVGELARA
NGLPPSAKLK IGTRITVPTK VAAVSAQPVA APAAPPAVAP KPAPAPVVHA AAATAGPVQK
VNLAAATATP EAAVVKPSVK AAEATGALPT FRWPVRGRVI TAYGARTNGK SNDGINVAVP
EGTPVKAAED GVVAYAGNEL KGYGNLVLVR HSNGYVTAYA HARELMVKRG DSIRRGQVIA
KSGQSGEAGS PQLHFEIRKG STPVDPLNFL NGA