Gene Nwi_1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1760 
Symbol 
ID3675640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1930981 
End bp1931472 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content61% 
IMG OID637713320 
ProductNADH dehydrogenase 
Protein accessionYP_318373 
Protein GI75675952 
COG category[C] Energy production and conversion 
COG ID[COG3761] NADH:ubiquinone oxidoreductase 17.2 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00569729 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0708647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAA ATCGAAACAG AATGATAATC GCGCGAGCCC TTGCGGGGGT TCGTGACACC 
CCCTGCGACG GATTTCCGGC AATGAAGCAG TTTTTCCTCA AGCTTTTTAC CTGGTGGAAC
GGCCAGACTT TCGGTACTCA GCTTTGGACG GCGCGGTTCG GTGAACTCGT CGGCAGGGAC
AGCGAGGGTA ACTGCTATTA CCGGACGCGA GGCGGACGGA TCGACCCGGC GCTTGGCTTC
GAGCGCCGCT GGGTGATCTA TAATGGTTAC ACGGAAGCCA CCCATATTCC GCCGGAGTGG
CATGGCTGGA TTCATCACGT TGTCGATGTT CCGCCGACCA AGGAAGACTA CCAGCCGCGC
GAATGGCAGA AGCCGCATGT GCCGAACATG ACGGGGACAC CGGCGGCCTA TCGACCGTCC
GGCTCGACGC TGGCGAGCGG CCGCCGTCCG AAGGCGACCG GCGATTATCA GCCCTGGACG
CCCGGCCAGT AG
 
Protein sequence
MSSNRNRMII ARALAGVRDT PCDGFPAMKQ FFLKLFTWWN GQTFGTQLWT ARFGELVGRD 
SEGNCYYRTR GGRIDPALGF ERRWVIYNGY TEATHIPPEW HGWIHHVVDV PPTKEDYQPR
EWQKPHVPNM TGTPAAYRPS GSTLASGRRP KATGDYQPWT PGQ