Gene Nwi_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1758 
Symbol 
ID3675638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1927795 
End bp1928988 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content66% 
IMG OID637713318 
Producthypothetical protein 
Protein accessionYP_318371 
Protein GI75675950 
COG category[S] Function unknown 
COG ID[COG4765] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.132522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.148123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCCCA GCCTTCTGCC TGATGGAAAT CAGCAGCGAG GCTCCGGGTG TCTTGATGCT 
TTTCACGTAA ACCGGCCTCG ATTTCGCTCC ATAACGCTAT TGCCTACGGA ATCAAGCGAG
CTCAGCCGCT GCCGCCAGTG GACGCGGAGC AGGTCGCCCT TTCCCCGCCG CAATCGACGT
GTTAACCGGA TTGCCGCGAG CGGCTTGGAG CCTTTAATCC CTGTACAATG GTCCGGCCCT
GATTCGAGCC TCACAAAGCC GCGCATGATA TTTCGAACCA TCGTTATAGC CGGTTGTGCG
GCTTTTGCAG GCGTCGCACT TGTCGCGGCC CCGCCTTCCG CGCGCGCCCA GATCGGAAAC
ATCTTCTCCG ACCCGCCACC GCGTCCGCCT GGCGCTATTC CACAGGGGCA GGCCGCGCCT
GAGGATGACG AGGAAGAGGT GCCCGAATTG CCGCCTGAGG GCCGCGTGTT GCCGGCGCCG
ATGCGTCCAC CGCCGGGGCA GGGCGTTCCG CCGCCCGGTC CGGTTCAGTC TCAGCCGCTG
CCGCCGCCGT CCGGAACCAC CGTGACTCCG CAGAACGCTC CGGGAGGCGC TGCCGTCGCG
CCGCCATCAC CCCGTCAGGC TCCCGAACAG AACGCCGCGC GACCGGCCCC GCCGGCGCCG
GCCACGCTAC AGCCCGGCGA CGAGGTCGTT ACCGAGGCCC CCGCCGAGAG GATCGTCAAC
AAGAAGGCTG TATTTTCCGG CCTGGATAAG ATCACCGGCC GCATCATCCA TTTCGACGAG
GATATCGGAG AGACCGTACA GTTCGGCGCG CTGCGGGTAA AAACCAGCGC CTGCTACACG
CGCCCCGCGA CCGAAGCCGC GAATACCGAC GCCTTCGTCG AGGTCGATGA GATCACGCTT
CAGGGCGAGG TGAAGCGAAT TTTCTCCGGA TGGATGTTCG CGTCGAGCCC CGGCCTGCAT
GGCGTCGAGC ATCCGATCTA TGATGTCTGG CTGACCGACT GCAAGGATCC GGAGACGACC
GTTATCGCCG AGCAGCCGGA TCAGCCCAAA CCGACGCCAC CCCCGCCAGC CAGGCGATCG
CGACAATCGA CCCGTCAGTC GCGTCAACCC GCGCCGCCGC CGCAACCAGC GCCAGTGCCT
CCCGCGCAGC GACAGCCGCA GAGCAATCCC TTCTTCCCGC CGTTCCAGAG GTAG
 
Protein sequence
MRPSLLPDGN QQRGSGCLDA FHVNRPRFRS ITLLPTESSE LSRCRQWTRS RSPFPRRNRR 
VNRIAASGLE PLIPVQWSGP DSSLTKPRMI FRTIVIAGCA AFAGVALVAA PPSARAQIGN
IFSDPPPRPP GAIPQGQAAP EDDEEEVPEL PPEGRVLPAP MRPPPGQGVP PPGPVQSQPL
PPPSGTTVTP QNAPGGAAVA PPSPRQAPEQ NAARPAPPAP ATLQPGDEVV TEAPAERIVN
KKAVFSGLDK ITGRIIHFDE DIGETVQFGA LRVKTSACYT RPATEAANTD AFVEVDEITL
QGEVKRIFSG WMFASSPGLH GVEHPIYDVW LTDCKDPETT VIAEQPDQPK PTPPPPARRS
RQSTRQSRQP APPPQPAPVP PAQRQPQSNP FFPPFQR