| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1744 |
|---|
| Symbol | |
|---|
| ID | 3676467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 1907483 |
|---|
| End bp | 1910164 |
|---|
| Gene Length | 2682 bp |
|---|
| Protein Length | 893 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637713304 |
|---|
| Product | Signal transduction histidine kinase |
|---|
| Protein accession | YP_318357 |
|---|
| Protein GI | 75675936 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.410742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.243263 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCTG GGTTCGGAGC ATTCTTTCAG CGGATGAAGT CGTCTTCGCT GTCGATCGGC
CAGATCACCT TTGGCGGTTT CTTCCTGGTG CTGGCGATCA TCGTGATAAC CAGCGTGGCC
AATGTCGTCG CGACCCGTCA TCTCGACAAT ACCTTTGCCG AATTGCAGCG GCTCGACAGC
GTCGTCGACC TCGCCGAGGA ACTCGATCGC CGCATGAACG AGTTGCGGCT GGCGGCGCGG
GACTACGTCA CCGACCCGCA GGCCCAGTCC AGCCGGGTGT GGGGCGCCAC GTCGTCCTTG
AACGAGATGC TCAAGAAGAC GCGCATCAAG CTTGCCCCAG AACAGCAGGA GATGATCGAT
GGCGTCACGC CGCGACTGGA GCACTACCGC AAGGGTATAG AACAGGCTGC GAACCTGATT
GGAGACCGCG CGAAGCTGAT CGAAACGCTG CCGCCGCTTC GCGAAAAACT CGAACTCATC
ATCGAGCAGT CCGCCGATCA GTCTGCGTCG AGAGCACTGT TTCGAGCGCA AAGCGACGTC
GCTGCCGCGC TGCTCGGGCA TGACCCGACG ACCGCGGAGC GGGCGGCTGA AAACATGCGC
GCCATTCGCG TGGACGAGCC GAAGGTGCGT GCCGCGGTCG AGGCCTATGC CGATGCCGTG
ATCGCGATAT CCTTGCGGGA GCGGCAGATC GCGGATCTCG ACCGGGATGT GCTGGGCGCG
GAAGGGCGGT TGATCGGGCA GGTGACGGAA CTGCTGCGCG AACTCAGCGC GGAGCGCGAG
CGGGTGCTGT CGCGCGATTT TGCCCGGACG CTTGCTGAAA CCAAATGGCA GAGCATCATT
CTCGGCAGCG TGGGAATCGT GATCGGCCTG CTCGCGGCGG TGTTCGTGGT CCGCCGGACC
GTCCGGCCAT TGAAGGCGAT CGCGAGGGCG ATCCGGAAAC TGGCTGGAGG CCAGAAGGAA
ACATCGATCC CCTCAACCGA GGTCGATAAT GAGATCGGGG ATATCGCACG CGCGGCCGAG
GTGTTTCGCC GGACGCTCGC TGAGGCGGAC TCCGCGCGAG AAGCCGCGGT TCGGGCGCTT
GCCGAGCAGC GCCTTGCCGA GGAGAGCTAT CGCAAGCTGT TCGAAGGTTC GGTCGACGGG
ATCTATGTCA CGACGCCGGC CGGTCAACTG CTCGACGCCA ATCCGGCGCT GGCGCGTATG
ATGGGATATG ATACCCCCGA CGACCTCTTC CGCGGCATCG GCAACAGCGC GCAGACGGTT
TACGTCGATA CAGATGCGCG CGCTAAGTAC CAGCAACGGA TGGAGCGTGA CGGGACTGTT
CGCGGATTCG AGTATCAGGT GCGTCAGCGC GATGGCGGCA TCCTGTGGCT CTCCGACAGC
GCGACCGCTG TCCGCGACGA AGACGGGCGC ATCGTTCGTT ATGAAGGCGT GGTCCGCGAC
ATCACCGATC AGAGGAGAGC AGAGGAGACG ATCGCGGAGG GGCGGCGTCT GCTGCAACTG
GTGATCGACA CCGTGCCGGC GGTGATCAAC GTCAAGAATG CGGAGATGCG TTACGTCCTG
ATGAATCGCT ACATGGCCGG CATCTTCGGG ATAGAGCCGG CGGATGCGAT AGGACGGACG
GCGGGCGAAG TCATGTCGCA TGACGATGCG GAAAAGACCG ATGAGACCGA CCGGCGGGTC
CTTGAGAGCG GTAAGGAGCT TGGTTTCTAC GAAGAAGAAT ATCAGGATTC GTCAGGCGAA
CCGCGACAAT GGCTCGTCAA CAAGCTCCCG ATCCGCGACG CCGACGGCCG CGTGGAAAAT
ATCGTCACGG TCGCGCTCGA CATCGGCGAC CGCAAGCGGA GCGAGCAGGA AATGCGACGC
GCCAAGGACG CCGCCGAGGC GGCGCTCAGT AATCTGCGCG CAACCCAGGA TTCGCTGATC
GAGGCGGAAA AACTGGCGGC GCTGGGACGT CTTGTTGCGG GCGTTGCTCA TGAGGTTAAC
AATCCGGTCG GCATCAGTCT GACGGTGGCT TCTTCGCTGG AGCGCAAGAT CGCCCTGTTC
GCCGCGGAGG TCGAGCGTGG GCAGTTGAGG CGCTCAAGCC TCAACGATTT CATTGCCGCC
AATCGCGATG CTGCCTCTCA ACTCGTCGCC AATCTCAATC GCGCTGCCGA ACTGGTCCAG
TCATTCAAGC AGGTTGCAGC GGACCGCAGC TATTCGGACA AGCGCACCTT CGACCTCGGC
GAACTCACCG AGCAGGTGGT GATGAGTCTG CGTCCCGCCC TGCGCAAGCA TCATGTCGCG
TTGACGGTCG ATTGCGAGCC TGATCTCACG ATGAACAGCT ACCCGGGGCC TTACGGCCAG
GTGTTGACCA ACCTGTTTCT CAACTCGGTC GCGCACGCCT TTCCGGACGG CAAGGGCGGC
ACGGTCAATA TTACCGTCCG GCGAGTAGGA GGGGACAATG TCGAGATTCT GTTCTCCGAC
GACGGGTGCG GCATGAACCC CGATGTGCGG CGCAAGGCGT TCGATCCCTT TTTCACGACG
AGGCGCGATC AAGGAGGAAC AGGCCTCGGT CTGCACATTG TCTACAATAT CGTAACGAGC
CGGCTGGGAG GGCGTATCGA ACTTGACTCA GATTCCGGGC AGGGCACGCG CATTCATATT
GTTCTGCCTC GGGTCGCGCC CATGGAACTT GCTGCGGAAT AG
|
|---|
| Protein sequence | MPSGFGAFFQ RMKSSSLSIG QITFGGFFLV LAIIVITSVA NVVATRHLDN TFAELQRLDS
VVDLAEELDR RMNELRLAAR DYVTDPQAQS SRVWGATSSL NEMLKKTRIK LAPEQQEMID
GVTPRLEHYR KGIEQAANLI GDRAKLIETL PPLREKLELI IEQSADQSAS RALFRAQSDV
AAALLGHDPT TAERAAENMR AIRVDEPKVR AAVEAYADAV IAISLRERQI ADLDRDVLGA
EGRLIGQVTE LLRELSAERE RVLSRDFART LAETKWQSII LGSVGIVIGL LAAVFVVRRT
VRPLKAIARA IRKLAGGQKE TSIPSTEVDN EIGDIARAAE VFRRTLAEAD SAREAAVRAL
AEQRLAEESY RKLFEGSVDG IYVTTPAGQL LDANPALARM MGYDTPDDLF RGIGNSAQTV
YVDTDARAKY QQRMERDGTV RGFEYQVRQR DGGILWLSDS ATAVRDEDGR IVRYEGVVRD
ITDQRRAEET IAEGRRLLQL VIDTVPAVIN VKNAEMRYVL MNRYMAGIFG IEPADAIGRT
AGEVMSHDDA EKTDETDRRV LESGKELGFY EEEYQDSSGE PRQWLVNKLP IRDADGRVEN
IVTVALDIGD RKRSEQEMRR AKDAAEAALS NLRATQDSLI EAEKLAALGR LVAGVAHEVN
NPVGISLTVA SSLERKIALF AAEVERGQLR RSSLNDFIAA NRDAASQLVA NLNRAAELVQ
SFKQVAADRS YSDKRTFDLG ELTEQVVMSL RPALRKHHVA LTVDCEPDLT MNSYPGPYGQ
VLTNLFLNSV AHAFPDGKGG TVNITVRRVG GDNVEILFSD DGCGMNPDVR RKAFDPFFTT
RRDQGGTGLG LHIVYNIVTS RLGGRIELDS DSGQGTRIHI VLPRVAPMEL AAE
|
|---|
| |