| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1727 |
|---|
| Symbol | glyA |
|---|
| ID | 3675131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 1887041 |
|---|
| End bp | 1888342 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637713285 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_318340 |
|---|
| Protein GI | 75675919 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.130178 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCTT CCGCCAAGAC CGCTTCCGCC CCTGATCCGT TCTTCGCGGG CACGCTGGCC
GAAGCCGATC CGGAGATCGC CGCCGCGATC ACCGGCGAAC TGGGCCGTCA GCGTCACGAG
ATCGAACTGA TCGCGTCGGA GAACATCGTC AGCCGTGCGG TTCTGGAGGC GCAGGGCTCG
GTGATGACCA ACAAGTACGC GGAGGGTTAT CCGGGCGCGC GCTATTACGG CGGATGCGAA
TGGGTGGATG TCGCCGAAAC GCTGGCCATC GAGCGCGCCA AGAAACTGTT CGGCGCCCGT
TTTGCCAACG TCCAGCCGAA TTCGGGCAGC CAGATGAACC AGGCGGTGTT TCTGGCGCTG
CTGCAGCCTG GCGATACCTT CATGGGGCTG GATCTGGCTG CCGGAGGGCA CCTGACGCAC
GGCGCGCCGG TCAACATGTC CGGCAAGTGG TTCAAGGTCG CGCACTATAC CGTGCGGCGC
GACGATCACC TGATCGATAT GGACGAGGTA GCCCGCCGCG CCGAGGAGGT GAAGCCGAAG
CTGATCATCG CCGGCGGTTC GGCCTATTCG CGACCGTGGG ATTTCAAGCG CTTTCGCGAG
ATCGCCGACA GCGTCGGCGC CTATCTGATG GTGGATATGG CGCACTTCGC GGGTCTGGTT
GCCGGGGGCG TCCATGCGTC GCCGGTCCCG CACGCGCATG TGACGACGAC CACGACCCAC
AAGTCGCTAC GCGGCCCGCG CGGCGGCCTG ATCCTGTGCA ATGACGAAGC GCTCGCCAAG
AAGTTCAATT CGGCCATTTT TCCGGGGTTG CAGGGCGGCC CGCTGATGCA TGTCATCGCC
GCCAAGGCCG TGGCGCTCGG TGAAGCGCTG CGGCCGGACT TCAAGATATA CGCGAAGAAC
GTTGTCGAAA ACGCTAGAGC GCTTGCTGAA AGCCTGCGTG GTCATGGGTT CGACATCGTC
TCCGGCGGCA CGGACAACCA CCTGATGCTG GTGGATTTGC GCCCCAAGGG ACTGAAAGGC
AACGTTTCGG AAAAGGCGCT CGTTCGCGCC GGCCTGACCT GCAACAAGAA CGGCATTCCC
TTCGATCCCG AAAAGCCGTT CGTGACCTCG GGCCTGCGTC TCGGTACGCC GGCCACCACC
ACGCGCGGCT TCGGGGTGAG CGAGTTCAAA CAGGTCGGCG GCCTGATTGC GGAAGTGCTT
ACGGCCATCG CACAGGCCGA GGACGGCAAG GCCCCGCTGG TCGAGGCGGC GGTGAAGGAG
AAGGTGAAGG CGCTGACGGA TCGCTTTCCG ATCTATCAAT AA
|
|---|
| Protein sequence | MDSSAKTASA PDPFFAGTLA EADPEIAAAI TGELGRQRHE IELIASENIV SRAVLEAQGS
VMTNKYAEGY PGARYYGGCE WVDVAETLAI ERAKKLFGAR FANVQPNSGS QMNQAVFLAL
LQPGDTFMGL DLAAGGHLTH GAPVNMSGKW FKVAHYTVRR DDHLIDMDEV ARRAEEVKPK
LIIAGGSAYS RPWDFKRFRE IADSVGAYLM VDMAHFAGLV AGGVHASPVP HAHVTTTTTH
KSLRGPRGGL ILCNDEALAK KFNSAIFPGL QGGPLMHVIA AKAVALGEAL RPDFKIYAKN
VVENARALAE SLRGHGFDIV SGGTDNHLML VDLRPKGLKG NVSEKALVRA GLTCNKNGIP
FDPEKPFVTS GLRLGTPATT TRGFGVSEFK QVGGLIAEVL TAIAQAEDGK APLVEAAVKE
KVKALTDRFP IYQ
|
|---|
| |