| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1725 |
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| Symbol | |
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| ID | 3675129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 1885267 |
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| End bp | 1886430 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637713283 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_318338 |
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| Protein GI | 75675917 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.214357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0663654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTCG GCGTTCTGGA GGAGGAGCAC GGCGCCAGCC TCCGGACGGA GAGGACCGTC
GATTTGCATT TCATGCAGCT CGCGCTTGCG CTGGGACGTC GTAGCCTGGG CGCGAGCGCA
CCCAACCCGG CCGTGGGCGC CGTCATCGTG AAGGACGGCG TGATCGTCGG CCGCGGCTGG
ACCCAGCCGG GAGGGCGTCC GCACGCGGAG GCCGAGGCGC TGCGGCGCGC GGGGGAGGCG
GCGCGTGGTG CGACATTGTA TGTCACGCTG GAGCCGTGTT CTCATGTCGG AAAAACCCCG
CCTTGCGCGG ACGCCGTGAT CGCAGCCGGC ATTACGCGGG TTGTATCCGC GATCGAGGAT
CCCACGCCCG AAGTCTCCGG GCAGGGCCAT GCGCGATTGC GCGCTGCTGG CGTGGCAGTG
GAGATCGGAC TTTGCGCGGC CGAGGCGGCG CACCACCATG CCGGACATTT CCGGCGGGTA
CGGGACAGAC GCCCGCACAT CATTCTCAAG CTCGCGGTGT CCAGCGACGG AAAGATCGCC
GCCGCCGGAG GCGTGCCGGT CGCCATCACA GGCGAGGCGG CGCGGGCGCG AGCGCATCTT
CTGCGCGCGC AATGCAGCGC GATCCTGGTC GGCATCGGCA CCGTACTGGC GGACGACCCT
CTCCTGACCT GCCGGCTTCC CGGCATGGAA ACACGCTCGC CGCTACGCGT GGTTCTGGAT
CAGGCGCTGC GCATTCCGGA AAGCAGCCGC CTTGTTCAGT CCGCGCGCGA GACCCCGCTC
TGGATCATGA CCTCGGAATT TGCCGAAGCA TCAAGGGCGA TGAAGCTTGG CGCGGCCGGC
GCGCGGGTGA TGCGCGTTCC GGGCGCGGCT GGAGCGCCCG GGCTCGATCT CGTGGCGGTT
CTCCGGGCTC TCTCGGAAAG CGGAGTCACC CGGCTGGTGG TGGAAGGCGG CGCGCGCGTC
GCGGCGTCGT TTATCGCGGC GGCGCTGGTT GACGAAGCCT GGCTGCTGCG CGGTCCGGAT
CCGATCGGCG ACGACGGCGT GGCCGCACTC GGGGCCTTGC CGCTGACCGT CATTACCGGG
TCGCCGGAGT TCAGGATGTG TGCGGGCGAG ACGCTGGATC AGGACGCCCT CGCGATTTAC
GAACGTGTCC GGAGCATAAG TTGA
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| Protein sequence | MIVGVLEEEH GASLRTERTV DLHFMQLALA LGRRSLGASA PNPAVGAVIV KDGVIVGRGW
TQPGGRPHAE AEALRRAGEA ARGATLYVTL EPCSHVGKTP PCADAVIAAG ITRVVSAIED
PTPEVSGQGH ARLRAAGVAV EIGLCAAEAA HHHAGHFRRV RDRRPHIILK LAVSSDGKIA
AAGGVPVAIT GEAARARAHL LRAQCSAILV GIGTVLADDP LLTCRLPGME TRSPLRVVLD
QALRIPESSR LVQSARETPL WIMTSEFAEA SRAMKLGAAG ARVMRVPGAA GAPGLDLVAV
LRALSESGVT RLVVEGGARV AASFIAAALV DEAWLLRGPD PIGDDGVAAL GALPLTVITG
SPEFRMCAGE TLDQDALAIY ERVRSIS
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