| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1716 |
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| Symbol | |
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| ID | 3674729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 1871714 |
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| End bp | 1874209 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637713274 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_318329 |
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| Protein GI | 75675908 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0706575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.372111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCT TGCTGCTGCG GTTCATGGGC TTTCTGTTTG CCGCGGGGAC CATTCTGTTT
CTGGTCGGCG TCGCGGCGGT CGCGGGATTG ATCTGGCATT TTTCCCAGGA CCTGCCGGAG
TATTCCCAGC TTCAGAATTA TGAGCCGCCG GTGATGACGC GCGTGCATGC ATCGGATGGC
TCGCTGCTCG GCGAGTATGC GAAGGAGCGC CGGCTCTACC TGCCGATACA GGCCGTGCCG
AAGCTGGTCA TCAACGCGTT CCTGGCCGCG GAGGACAAGA ATTTCTATGA GCACGGCGGC
ATCGATTATC AGGGCATGGC GCGCGCGGCG CTGCTTTATG CTCAGAACTA CGGCACCAAC
AAGAGACCGC AGGGCGCCTC CACGATCACC CAGCAGGTTG CCAAGAACTT TCTTCTGACC
AACGAAGTTT CCTTTACCCG CAAGATCAAG GAAGCATTGC TGGCCATGCG CCTTGAGCGC
ACCTATTCCA AGGACAAGAT ACTCGAACTG TATCTGAACG AGATTTACCT CGGCCTTGGC
GCGTACGGTA TCGCGGCCGC ATCGCTCGTG TACTTCGACA AATCGGTCAA CGAATTGAGC
GTCGCCGAGG CCGCATATCT CGCGGCCCTG CCAAAGGCGC CCTCGACGCT GCACCCCGTC
AAGAACCGTG AACGCGCGAT CGAACGGCGC GACTATGTCG TCGACCGGCT GCTGGAGAAC
GGCTGGGTCA ACCAGGCCGA CGCGGAAAAA GCTCGCAAGC AGCCGCTGAT CGTCACGGGC
CGCTCCAACG GGGCGCATAC TTTCGCCGGC GAATATTTCG CTGAGGAGGT TCGTCGCGAC
CTGTTCGAAC GCTATGGCGA AGAAAAGCTC TACGGGGGCG GCCTGTCCGT CAGGACGACG
CTCGATCCGG AATTGCAGGT GATCGCGCGC AAGACCATGG CCAATGGCCT CGTCACCTAT
GACGAAGCTC AGGGCTGGCG CGGGCCGGTG AGCAAGCTCG ACATCTCCGG CGACTGGGGG
GTGAAACTCG CCGAGGTCAA ATCGTTGTCC GATATCTCCC CGTGGCGAAT GGCGGTCGTG
CTCGAGTCCG ACGACAAATC GGCGCGGATC GGCTTCCAGC CCGGACGCGA GCTTGGGGGC
GCCGTAAGCC GCGAGCGGCG AACAGGTTTG ATCACGCTTG ACGGGGTGAA ATGGGCCAAG
GCCACGTCCG GGTCGGCGCG AGGTCGTACG CCGACAAAGG TGTCTCAAGT GCTTTCGCCC
GGCGATGTGA TCTATGCCGA TCCCCTGATC GCGAAGGATG GCAAGATCGT CGAGGGAGAA
TACCGGTTGC GCCAGTTGCC TGAAGTGTCC GGCGCGATGG TGGCGATGGA TCCGCGGACC
GGCCGTGTGC TGGCCATGGT CGGCGGCTTC TCCTTCGATC AAAGCCAGTT CAATCGGGCA
ACGCAGGCGT ACCGGCAGCC AGGCTCCTCG TTCAAGCCGC TCGTCTATTC CTCGGCGCTC
GACAACGGTT ACACGCCTTC CACGGTCGTG GTCGATGCGC CGATCGAGAT CGACCAGGGG
CGCGGCTCGG GCGTTTGGCG GCCGGAAAAC TACTCGAAAG AAAAGTACTA CGGTCCGCAA
ACGCTCCGAA ACGCGCTGCG GCTTTCGCTC AACACCGTTA CGGTCCGCCT GGCGCAGGAT
GTCGGGATGC CGCTGATCGG CGAGTATGCC AAGCGCTTCG GCGTTTACGA TGAACTGCCG
AACTATCTGT CCTACGCACT GGGGGCCGGC GAGACCACGG TGCTGCGCAT GGTGACCGCG
TATTCGATGT TCGACAACGG CGGCAGGCGC GTGAAGCCGA CCCTGATCGA CCGCATTCAG
GATCGTTACG GTCACACCAT CTACAAGCAC GACGCGCGGG AGTGCCGCGG CTGCGAGGCG
CCGGAGGGCT GGAAGAATCA ATCCGAACCC CAGTTGATCG ATCACCGCGA GCAGGTGCTG
GATTCAATGA CGGCTTACCA GATCACCTCC ATGATGGAAG GTGTGGTGCA GGCGGGCACC
GCCACGGTCA TGCGCGAGGT CGGCAAGCCG ATCGCCGGCA AGACGGGCAC GACTAACGAC
CAGAAGGATG CCTGGTTCAT CGGATTCTCG CCAGACCTCG TGGTCGGCAT CTATATAGGG
TATGACAAGC CGCGCAATCT CGGCCGCAGG GCGACGGGCG GACATCTGGC GGCTCCGATC
GCGCGGGACT TCATGAAGAT CGCGCTTGCC GACAAGCCGG CCACTCCGTT CCGCATTCCT
CCCGGTATCA AGCTGGTTCG CGTTGACGCC AAGTCCGGCA TGCGTGCAGG CCCCGGCAGC
GGTGGCAAGA CGATCCTTGA AGCTTTCAAG CCTGGCACGG CGCCGCCTGA CAACTATTCC
GTGATCGGCG TGGCTGATGC AGACGGACGC GAGCCGCAGC CGCTGCCCGA CGCCGACCGC
AGCCTGTTCC GGCCCGGCAC CGGAGGGCTT TACTAG
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| Protein sequence | MMRLLLRFMG FLFAAGTILF LVGVAAVAGL IWHFSQDLPE YSQLQNYEPP VMTRVHASDG
SLLGEYAKER RLYLPIQAVP KLVINAFLAA EDKNFYEHGG IDYQGMARAA LLYAQNYGTN
KRPQGASTIT QQVAKNFLLT NEVSFTRKIK EALLAMRLER TYSKDKILEL YLNEIYLGLG
AYGIAAASLV YFDKSVNELS VAEAAYLAAL PKAPSTLHPV KNRERAIERR DYVVDRLLEN
GWVNQADAEK ARKQPLIVTG RSNGAHTFAG EYFAEEVRRD LFERYGEEKL YGGGLSVRTT
LDPELQVIAR KTMANGLVTY DEAQGWRGPV SKLDISGDWG VKLAEVKSLS DISPWRMAVV
LESDDKSARI GFQPGRELGG AVSRERRTGL ITLDGVKWAK ATSGSARGRT PTKVSQVLSP
GDVIYADPLI AKDGKIVEGE YRLRQLPEVS GAMVAMDPRT GRVLAMVGGF SFDQSQFNRA
TQAYRQPGSS FKPLVYSSAL DNGYTPSTVV VDAPIEIDQG RGSGVWRPEN YSKEKYYGPQ
TLRNALRLSL NTVTVRLAQD VGMPLIGEYA KRFGVYDELP NYLSYALGAG ETTVLRMVTA
YSMFDNGGRR VKPTLIDRIQ DRYGHTIYKH DARECRGCEA PEGWKNQSEP QLIDHREQVL
DSMTAYQITS MMEGVVQAGT ATVMREVGKP IAGKTGTTND QKDAWFIGFS PDLVVGIYIG
YDKPRNLGRR ATGGHLAAPI ARDFMKIALA DKPATPFRIP PGIKLVRVDA KSGMRAGPGS
GGKTILEAFK PGTAPPDNYS VIGVADADGR EPQPLPDADR SLFRPGTGGL Y
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