| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1713 |
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| Symbol | |
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| ID | 3674726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1867458 |
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| End bp | 1869806 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637713271 |
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| Product | 3'-5' exoribonuclease, VacB and RNase II/ribonuclease R |
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| Protein accession | YP_318326 |
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| Protein GI | 75675905 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.631532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.56941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAAAC CGCGCGCCAG GAATTTTCCG GATCGCGAGG CCATCGTCGC TTTCATCCGC
GCGCATCCCG GCCGGGCTGG CACACGCGAG ATCGCTCATG AGTTCGGCTT GAAGAACGCC
GATCGCGCCG AACTCAAGCA TATCCTTCGC GCGCTCGCGG ATGACGGAAC AATCGTGAAA
CGGAGCCGCA AGCTGCGGAA GCCGGAAACG CTGCCGCCAA CGCTGGTAGC CGATATTACG
GGGCGAGATC GCGACGGCGA ACTGATCGCC ACGCCGACCG AATGGGACGA TGAAGCAACG
CCCGCGCCGA GGATTCTCAT TCATGTGCCG CGTCGGGCGA AGCCCGGCAC CGTGGCAGGC
GTCGGCGATC GTGCGCTGCT GCGCATCGAG ACAATCGAGT CCGACGAAAC CGCAAGCTAT
CGCGCTCGCG TCATCAGGGT CATCGATCGC ACCCGCGCGC GTATGCTCGG CATCTATCGC
GCGTCGCCTC AGGGCGGCGG ACGCCTTGTG CCGGTGGACA AGAAGCAGGC CGGGCGCGAG
CTGAACATCG CGAAAGCCGA CAGCGCGGGC GCGGAGGACG GCGATCTCGT GAGTGTCGAA
CTGGTGCGGA CCCGCGGTTT CGGACTTGCT TCTGGCAAGG TGAAGGAGCG GCTTGGCTCG
CTCGCGACCG AAAAGGCCGT CAGCCTGATC GCGATCCACG CCCATGACAT TCCGCAGGAG
TTTACGCCGG CCGCCTTGCG CGAAGCCGCC GCTGCGAAGC CTTCCGCCTT GCAAGGTCGC
GAAGACTGGC GCGCGGTGCC GCTCATCACC ATCGATCCCC CCGATGCGAA GGATCACGAC
GACGCGGTTC ACGCCGCGCC GGACGATGAT CCCAACAACA CGGGCGGCGC CATCGTCACC
GTCGCCATCG CTGACGTCGC CTATTATGTG CGGCCTGAAT CGGCGCTGGA TCGTGAAGCT
CTGGAGCGCG GCAATTCGGT CTATTTCCCG GATCGCGTGG TCCCGATGCT GCCCGAGCGC
ATTTCAAACG ATCTCTGCTC ACTTGTTCCG GGCGAAGCAC GCGGGGCTCT CGCCGTGCGC
ATGGTGATCG ACGCCGACGG ACGCAAGCGT TCGCACACCT TTCATCGCAT CCTGATGCGC
TCGGCAGCGA AGCTTGCTTA CTCGCAGGTG CAGGCCGCGA TCGACGGCAA CCCGGATGAC
GCGACCGCCC CCCTGCTCGA ACCGATCCTG AAACCGCTCT ACGCGGCCTT TGCTCTGGTG
AAGCGCGCGC GCGACGAGCG CGATCCGCTC GATCTTGAAT TACCCGAACG CAAGATTCTG
CTGAAGAAGG ACGGAACGGT CGATCGTGTG ATCGTTCCGG ATCGGCTCGA TGCGCATCGG
CTGATCGAGG AATTCATGAT CCTTGCAAAC GTCGCCGCGG CCGAGATGCT GGAAAAGAAA
GGGCTGCCGC TGATCTATCG CGTGCACGAC GAGCCGACGG TCGAGAAGGT TCACAACCTG
CGCGAGTTCC TGAAAACTCT CGATATGTCC TTCGCCAGAA GCGGCGCGCT GAGGCCGGAG
TTGTTCAATC GCGTGCTGGA TCAGGTCAGG GGCCATGATT CCGAATCGCT GGTGAACGAG
GTGGTTCTTC GTTCGCAGGC ACAGGCTGAG TATTCGGCGG AGAACTATGG CCACTTTGGT
CTCAACCTGC GGCGCTACGC GCATTTCACA TCGCCGATCA GGCGATATGC AGATCTCGTC
GTGCACCGCG CCCTGCTCCG TGCGCTCGGT CTTGGCGACG GCGCGCTGCC GGATTCCGAC
AACGCCGAAA CGCTCGCCGA AATAGCCGCG CGCATTTCCG TCACCGAGCG GCGCGCCATG
AAGGCCGAAC GCGAGACGGC CGATCGCCTG ATCGCGCATT TTCTCGCCGA CCGCATCGGC
AACATCTTCG AGGCGCGTAT TTCCGGTGTC ACCCGCGCAG GGCTTTTCGT GAAGCTGGCC
GACACCGGCG CCGACGGGCT GATCCCGATT CGCTCGCTGG GGACCGAATA TTTCAAGTAC
GACGAGACCC GGCATGCCCT GGTGGGGTCC CGCAGCGGTT CCATGCACAA GCTGGGTGAC
GTGGTGGAGG TTCGTCTGGT AGAAGCTGTA CCCTTGGCTG GCGCTCTGCG GTTCGAACTC
TTATCCGGAG CCGAGGTGAG GCCGCGCTCC CCCCGCGCGC GGGGTGGAGG GAAAATAAAG
ACGCCGCGTG GTCGGAACGC GGGTCATCCT GATGTTCATT CGAAAGCCCA TCCGGGCCGT
AAACCGCGCG GGACATCGCG CAAGCCGGGC AGGAGCAAGG CCGGCAAACC GAAGAAGGGC
AAATCATGA
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| Protein sequence | MSKPRARNFP DREAIVAFIR AHPGRAGTRE IAHEFGLKNA DRAELKHILR ALADDGTIVK
RSRKLRKPET LPPTLVADIT GRDRDGELIA TPTEWDDEAT PAPRILIHVP RRAKPGTVAG
VGDRALLRIE TIESDETASY RARVIRVIDR TRARMLGIYR ASPQGGGRLV PVDKKQAGRE
LNIAKADSAG AEDGDLVSVE LVRTRGFGLA SGKVKERLGS LATEKAVSLI AIHAHDIPQE
FTPAALREAA AAKPSALQGR EDWRAVPLIT IDPPDAKDHD DAVHAAPDDD PNNTGGAIVT
VAIADVAYYV RPESALDREA LERGNSVYFP DRVVPMLPER ISNDLCSLVP GEARGALAVR
MVIDADGRKR SHTFHRILMR SAAKLAYSQV QAAIDGNPDD ATAPLLEPIL KPLYAAFALV
KRARDERDPL DLELPERKIL LKKDGTVDRV IVPDRLDAHR LIEEFMILAN VAAAEMLEKK
GLPLIYRVHD EPTVEKVHNL REFLKTLDMS FARSGALRPE LFNRVLDQVR GHDSESLVNE
VVLRSQAQAE YSAENYGHFG LNLRRYAHFT SPIRRYADLV VHRALLRALG LGDGALPDSD
NAETLAEIAA RISVTERRAM KAERETADRL IAHFLADRIG NIFEARISGV TRAGLFVKLA
DTGADGLIPI RSLGTEYFKY DETRHALVGS RSGSMHKLGD VVEVRLVEAV PLAGALRFEL
LSGAEVRPRS PRARGGGKIK TPRGRNAGHP DVHSKAHPGR KPRGTSRKPG RSKAGKPKKG
KS
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