Gene Nwi_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1709 
Symbol 
ID3674722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1862329 
End bp1862721 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content65% 
IMG OID637713267 
ProductXRE family transcriptional regulator 
Protein accessionYP_318322 
Protein GI75675901 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.105629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.300515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCGGC CCCGCGCGCA TTCACTCAGG CTTAACGTCC ATCACCGACG ATCTCTCGAA 
TCGGAGGTGA GTATGCAGCG ATTGCGTTTG AAAGCAGACG GACGGATCGT GGAAATCCGC
GATGGGAAAG AGTTTCCGCT ATCACCCTCC ATGCACGTCG CGGGCGCAGC TTCCGATGAT
GCTGGACCGA GCTCGGTGCC TGAGGTCAGA AGCCTGCGGC GGCGGGCGCG GTTGACCCAG
GTCGAGTTCG CGGCGCGGCT GGGCGTTCCC GTTGAAACCA TCCGCAACTG GGAGCAGGGC
AAGCGGATTC CGCGCGGACC CGCGCGCGCG CTCCTTGCGG TCGTTGCCCA TGCGCCCGAA
ACCGTGTTCG CCGCCCTCGA TGGTCGCGAA TAG
 
Protein sequence
MPRPRAHSLR LNVHHRRSLE SEVSMQRLRL KADGRIVEIR DGKEFPLSPS MHVAGAASDD 
AGPSSVPEVR SLRRRARLTQ VEFAARLGVP VETIRNWEQG KRIPRGPARA LLAVVAHAPE
TVFAALDGRE