Gene Nwi_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1700 
Symbol 
ID3675723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1855052 
End bp1855948 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content62% 
IMG OID637713258 
Productheat shock protein DnaJ 
Protein accessionYP_318313 
Protein GI75675892 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.20246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.724162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGG GCTTGACCGG ATCGGTCTTG ACCGGAGATG CGATACCAGC TTGCGTGAGA 
AAACGCTTCC AGAACAACGG TTCGGGGTTG GCTTCCTCGT GGCGTCGCTA TGTCGCCGCA
GGCCACCGCA TACAATCGCT TTCATCGACC GCGCCGAGCT ACTATTTATT CGCCATGCCG
ACACTGATAG CAGGCCTCTT CACGTTCCTG TTTCTGTATT TGCTGCTTCA ATTGTTGCGG
GCGGCAAATC CGGCCGTTCT GGCGCGAGCC ATCAGGCTCG CCGGCGGCAT CATCGCGTTT
GGAATGGCGG CTTTCATAGG CAGCAGGGGG GAGCTGGCGG TTGCGCTGCC GCTAGCGCTT
CTCGGCGTCG GACTTTTGGG ATGGTCGTCC TCGGGCATGT CATTCTTCGC CAGGCTTTTT
GGCGCGGGAA TGCAGCGTAC GGCCCACGGA CACACGTCCC AGGTTCGTTC GCGGTTTCTC
GAAATGGTCC TGGATCACGC CAGCGGCCGC CTCGGCGGAT GGATCATTGA CGGACCCGAT
GCCGGCCGCT CGCTGGATGA CTTCGACCTG CCTCGACTCC TCGCCATGAT GACAGGCTTC
GACGCGGAGA GTTGCGCGCT ACTTGAAGCT TATCTGGACC GCAGGTTTCC CGCCTGGCGT
CATAACGCGC AAGGCGATCC GGCAGGGGGG AGGAGCCGCG CGTCGCCGGG CGGCAAAATG
ACGGACGAGG AGGCCTATCA GATCCTTGGC TTGCAGCCGG GGGCGGGAAA CGACGAGATT
CGTCGCGCGC ATCGGGGGCT GATGAAGAAA CTGCATCCCG ACCAGGGGGG GTCGACGTAC
CTCGCGGCCC GCGTAAACGC GGCCAAGGAT ACTTTGCTTC GCACTCATCG CAGCTAA
 
Protein sequence
MSSGLTGSVL TGDAIPACVR KRFQNNGSGL ASSWRRYVAA GHRIQSLSST APSYYLFAMP 
TLIAGLFTFL FLYLLLQLLR AANPAVLARA IRLAGGIIAF GMAAFIGSRG ELAVALPLAL
LGVGLLGWSS SGMSFFARLF GAGMQRTAHG HTSQVRSRFL EMVLDHASGR LGGWIIDGPD
AGRSLDDFDL PRLLAMMTGF DAESCALLEA YLDRRFPAWR HNAQGDPAGG RSRASPGGKM
TDEEAYQILG LQPGAGNDEI RRAHRGLMKK LHPDQGGSTY LAARVNAAKD TLLRTHRS