Gene Nwi_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1685 
Symbol 
ID3674539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1837922 
End bp1839145 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content61% 
IMG OID637713243 
Productaminodeoxychorismate lyase 
Protein accessionYP_318298 
Protein GI75675877 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA GGCCGCCCAT TTCTCCACGC AGTCCACGCG CCGCGCTTGA ACCCGAACAG 
GTACCGCCGC CACCGAAACG TTCCGCGCGC GTGCGAAGCC CGCTGGTGGT TGCAGGCAAC
GCGATCATTA CCGTTCTGTT GATCGGGATG CTTGGAGTCG GCGGCGTTCT TGTCTATGGC
AAGCAGAAGA TCGAAGCGCC GGGACCGCTG CAGGAAGAAA AGATCGTCAA CATTCCGTCC
CGCGCCGGAA TGAACGACAT CGCCGACATT CTCCAGCGCG AAGGTGTGAT CGACAGCAAT
CGTTGGGCGT TCATCGGAGG CGTATTCGCA CTGAAGGCGC GCGCTGATCT GAAGCCCGGA
GAGTATGCAT TCCAGAAGAA CGCCAGTCTG CGTGAAGTCA TCGGCACCAT TGTCGATGGC
AAGGTGGTCC AGCATCCCAT GACGATTCCC GAGGGCCTGA CCTCCGAACA GATCGCGGCA
CGGATATCCG AGAACGAGAT TTTCTCAGGC ACGCTTCGCG AGATTCCACG CGAGGGTACG
TTGCTGCCCG AGACATACAA GTTCCCGCGA GGCACCAGCA GGGACCAGGT GATTCAGCGC
ATGCAGCAGA CGCAGAAGCG CGTGCTCGCG GAAATCTGGG AGCGCCGTGC CTCGGATGTA
CCCGTCAAAA CACCTGAGCA GCTCGTTACA CTGGCCTCTA TCATTGAAAA GGAAACCGGT
AAGGCGGATG AACGCAGCCG CGTCGCGGCG GTGTTCGTCA ACCGCCTGAA ACAGAGAATG
AAGCTGCAGT CCGACCCGAC GATCATTTAT GGCCTGGTCG GAGGCAAGGG AACGCTGGGA
CGGCCGATCA AGCGCAGCGA AATCATGCAT GCGTCTCCCT ACAACACCTA CGTGATCGAC
GGATTGCCGC CCGGACCGAT CGCGAATCCA GGCCGGGCTT CGCTTGAAGC GGCGGCAAAT
CCGGCGCGAA CGCGCGACCT GTTCTTTGTC GCCGATGGAA GCGGGGGTCA CAGCTTCACC
GAGACCTACG AACAGCATCA GAAGAACGTC GCCCGGTTGC GGGCCATGGA GAAGCAGATT
CAGAACGATG CGGTTGAGCC GATAGATGAC CCGCCGCCTG CGGCCGCGCC AACCGCAACG
GAGAGCGGCG CGACACGGGA CGAACCTTCC TCGAAGCCTG CCCCCAAACC CGCTCCGCGG
ACCCGAACCC GGCCGGACCG ATAG
 
Protein sequence
MTERPPISPR SPRAALEPEQ VPPPPKRSAR VRSPLVVAGN AIITVLLIGM LGVGGVLVYG 
KQKIEAPGPL QEEKIVNIPS RAGMNDIADI LQREGVIDSN RWAFIGGVFA LKARADLKPG
EYAFQKNASL REVIGTIVDG KVVQHPMTIP EGLTSEQIAA RISENEIFSG TLREIPREGT
LLPETYKFPR GTSRDQVIQR MQQTQKRVLA EIWERRASDV PVKTPEQLVT LASIIEKETG
KADERSRVAA VFVNRLKQRM KLQSDPTIIY GLVGGKGTLG RPIKRSEIMH ASPYNTYVID
GLPPGPIANP GRASLEAAAN PARTRDLFFV ADGSGGHSFT ETYEQHQKNV ARLRAMEKQI
QNDAVEPIDD PPPAAAPTAT ESGATRDEPS SKPAPKPAPR TRTRPDR