| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1653 |
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| Symbol | |
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| ID | 3675388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1797177 |
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| End bp | 1799234 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637713211 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_318266 |
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| Protein GI | 75675845 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAAAT CACTGAAATC GAACATTAAA AAGAAACAAG CTGACGACCT TTTCGCGGCT
TCGGAAACCA AGGGCCGGTC CTCCGCGAGG GCCCCAGGCC GGGCATCGGG AGCCGAGGCG
GACTATACCG CCGCCGACAT CGAGGTGCTG GAGGGACTTG AGCCGGTCCG CCGCCGCCCC
GGAATGTATA TCGGCGGCAC CGACGAGAAG GCGCTGCATC ATCTGTTCGC CGAGGTGATC
GACAACGCCA TGGACGAGGC GCTGGCCGGC CACGCCACCT TCATCGTGGT GGAGCTTGCC
GCTGACGGCT TCCTCACCGT CACCGACAAC GGGCGCGGCA TCCCGGTCGA TCCGCACCCG
AAATTCCCGA AGAAATCGGC GCTTGAAGTC ATCATGTGCA CGCTGCATTC GGGCGGCAAG
TTCGACTCCA AGGTGTATGA AACCTCCGGC GGCCTGCACG GCGTCGGCGT TTCCGTGGTC
AACGCCCTCT CCTCGCACCT CGAAGTGGAA GTGGCGCGCA GCCAGAACCT CTACAGGATG
ACCTTCGAGC GCGGCCACCC CAAGGGCAAG CTCGAGGACC TCGGCAGGAT AGCCAACCGC
CGCGGCACCA CCATTCGTTT CAAGCCGGAC ACTGAAATCT TCGGGGCGAA GGCCGCGTTC
AAGCCGCAGC GCCTGTTCAA GATGACGCGC TCGAAGGCCT ACCTGTTCGG CGGCGTCGAA
ATCCGCTGGC GGTGCGCGCC GGAACTGCTC AAGGGCCTCG AGGATCTTCC TCCGGAAGCG
ACGTTCCACT TCCCCGGCGG CCTGAAAGAC TACCTTGCCG CGGCGATCCA CAAGGACACG
CTGGTCCATC CGGATATCTT CTCTGGCAGA TCGGGCCGCA ACGGCGCGCA CGGCGCCTGC
GAATGGGCGG TGGCATGGAC CGCGGATGCC GACGGATTCC TGTCCTCCTA CTGCAACACG
GTGCCGACGC CCGACGGCGG CACCCATGAG TCGGGCTTGC GCAGCGCGCT GCTGCGCGGG
CTGAAGGATC ATGCCGAGCG CGTCGGCCAG GGCAAGCGCG CGGGCAGCAT CACGTCGGAG
GATGTGATGG TGGGCGCCGC CGTGATGCTC AGCGTGTTCG TGCGCGAGCC TGAGTTTCAG
GGCCAGACCA AGGACCGCCT CGCCACCGCC GAGGCGTCGC GGATCGTCGA GCAGGCGATC
AAGGATCCGT TCGATCATTG GCTGTCCGGC AATCCGGCGC AGGCCAACAG GCTGCTCGAC
TTCGTGATCG AGCGCGCGGA CGAGCGACTG CGCCGCCGCG CCGAGAAGGA AACCTCGCGC
AAGAGCGCCG TGAAGAAGCT TCGGCTGCCC GGCAAGCTTG CCGACTGCAC CAACACCGCG
ACGGAAGGCT CGGAGCTGTT CATCGTCGAG GGCGACTCGG CCGGCGGCAG CGCCAAGCAG
GCGCGCGATC GCAAGACCCA GGCCGTGCTG CCTTTGCGCG GCAAAATCCT CAACGTCGTA
TCCGCGACGC GGGACAAGGT CACAGCCAAC GCCCAGTTGG CGGATCTCAT CCAGGCGCTG
GGCTGCGGCA CCGGGACCAA CTACCGCGAG GAGGATCTGC GCTATTCACG CGTCATCATC
ATGACCGACG CCGATGTCGA TGGCGCCCAT ATCGCCTCGC TGCTGATTAC GTTCTTCTAC
CGGCAGATGC CTCGCCTGAT CGACGAGGGT CACCTCTACC TCGCGGTACC CCCGCTTTAT
CGCCTCACCC ACGGCAGCAA GACGGTCTAC GCCCGCGACG AGGCCCACAA GGATGCGCTG
CTCAAGAGCG AGTTCAACGC CAACGCCAAG GTCGATGTCG GCCGGTTCAA AGGGCTGGGC
GAGATGATGC CGGCGCAGCT CAAGGAAACC ACGATGGATC CCGCCAAGCG CACGATGCTG
CGGGTCATGC TGCTTGCGGA AGATCGCGAG GACACGGCGG ATTCAGTCGA GCGGTTGATG
GGCACCAAGG CGGAGGCGCG CTTCGCCTTC ATTTCGGACA AGGCTGTATT CGCCAGCGAG
GACATGCTGG ACGTTTAA
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| Protein sequence | MVKSLKSNIK KKQADDLFAA SETKGRSSAR APGRASGAEA DYTAADIEVL EGLEPVRRRP
GMYIGGTDEK ALHHLFAEVI DNAMDEALAG HATFIVVELA ADGFLTVTDN GRGIPVDPHP
KFPKKSALEV IMCTLHSGGK FDSKVYETSG GLHGVGVSVV NALSSHLEVE VARSQNLYRM
TFERGHPKGK LEDLGRIANR RGTTIRFKPD TEIFGAKAAF KPQRLFKMTR SKAYLFGGVE
IRWRCAPELL KGLEDLPPEA TFHFPGGLKD YLAAAIHKDT LVHPDIFSGR SGRNGAHGAC
EWAVAWTADA DGFLSSYCNT VPTPDGGTHE SGLRSALLRG LKDHAERVGQ GKRAGSITSE
DVMVGAAVML SVFVREPEFQ GQTKDRLATA EASRIVEQAI KDPFDHWLSG NPAQANRLLD
FVIERADERL RRRAEKETSR KSAVKKLRLP GKLADCTNTA TEGSELFIVE GDSAGGSAKQ
ARDRKTQAVL PLRGKILNVV SATRDKVTAN AQLADLIQAL GCGTGTNYRE EDLRYSRVII
MTDADVDGAH IASLLITFFY RQMPRLIDEG HLYLAVPPLY RLTHGSKTVY ARDEAHKDAL
LKSEFNANAK VDVGRFKGLG EMMPAQLKET TMDPAKRTML RVMLLAEDRE DTADSVERLM
GTKAEARFAF ISDKAVFASE DMLDV
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