Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1653 |
Symbol | |
ID | 3675388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 1797177 |
End bp | 1799234 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637713211 |
Product | DNA topoisomerase IV subunit B |
Protein accession | YP_318266 |
Protein GI | 75675845 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0034 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAAAT CACTGAAATC GAACATTAAA AAGAAACAAG CTGACGACCT TTTCGCGGCT TCGGAAACCA AGGGCCGGTC CTCCGCGAGG GCCCCAGGCC GGGCATCGGG AGCCGAGGCG GACTATACCG CCGCCGACAT CGAGGTGCTG GAGGGACTTG AGCCGGTCCG CCGCCGCCCC GGAATGTATA TCGGCGGCAC CGACGAGAAG GCGCTGCATC ATCTGTTCGC CGAGGTGATC GACAACGCCA TGGACGAGGC GCTGGCCGGC CACGCCACCT TCATCGTGGT GGAGCTTGCC GCTGACGGCT TCCTCACCGT CACCGACAAC GGGCGCGGCA TCCCGGTCGA TCCGCACCCG AAATTCCCGA AGAAATCGGC GCTTGAAGTC ATCATGTGCA CGCTGCATTC GGGCGGCAAG TTCGACTCCA AGGTGTATGA AACCTCCGGC GGCCTGCACG GCGTCGGCGT TTCCGTGGTC AACGCCCTCT CCTCGCACCT CGAAGTGGAA GTGGCGCGCA GCCAGAACCT CTACAGGATG ACCTTCGAGC GCGGCCACCC CAAGGGCAAG CTCGAGGACC TCGGCAGGAT AGCCAACCGC CGCGGCACCA CCATTCGTTT CAAGCCGGAC ACTGAAATCT TCGGGGCGAA GGCCGCGTTC AAGCCGCAGC GCCTGTTCAA GATGACGCGC TCGAAGGCCT ACCTGTTCGG CGGCGTCGAA ATCCGCTGGC GGTGCGCGCC GGAACTGCTC AAGGGCCTCG AGGATCTTCC TCCGGAAGCG ACGTTCCACT TCCCCGGCGG CCTGAAAGAC TACCTTGCCG CGGCGATCCA CAAGGACACG CTGGTCCATC CGGATATCTT CTCTGGCAGA TCGGGCCGCA ACGGCGCGCA CGGCGCCTGC GAATGGGCGG TGGCATGGAC CGCGGATGCC GACGGATTCC TGTCCTCCTA CTGCAACACG GTGCCGACGC CCGACGGCGG CACCCATGAG TCGGGCTTGC GCAGCGCGCT GCTGCGCGGG CTGAAGGATC ATGCCGAGCG CGTCGGCCAG GGCAAGCGCG CGGGCAGCAT CACGTCGGAG GATGTGATGG TGGGCGCCGC CGTGATGCTC AGCGTGTTCG TGCGCGAGCC TGAGTTTCAG GGCCAGACCA AGGACCGCCT CGCCACCGCC GAGGCGTCGC GGATCGTCGA GCAGGCGATC AAGGATCCGT TCGATCATTG GCTGTCCGGC AATCCGGCGC AGGCCAACAG GCTGCTCGAC TTCGTGATCG AGCGCGCGGA CGAGCGACTG CGCCGCCGCG CCGAGAAGGA AACCTCGCGC AAGAGCGCCG TGAAGAAGCT TCGGCTGCCC GGCAAGCTTG CCGACTGCAC CAACACCGCG ACGGAAGGCT CGGAGCTGTT CATCGTCGAG GGCGACTCGG CCGGCGGCAG CGCCAAGCAG GCGCGCGATC GCAAGACCCA GGCCGTGCTG CCTTTGCGCG GCAAAATCCT CAACGTCGTA TCCGCGACGC GGGACAAGGT CACAGCCAAC GCCCAGTTGG CGGATCTCAT CCAGGCGCTG GGCTGCGGCA CCGGGACCAA CTACCGCGAG GAGGATCTGC GCTATTCACG CGTCATCATC ATGACCGACG CCGATGTCGA TGGCGCCCAT ATCGCCTCGC TGCTGATTAC GTTCTTCTAC CGGCAGATGC CTCGCCTGAT CGACGAGGGT CACCTCTACC TCGCGGTACC CCCGCTTTAT CGCCTCACCC ACGGCAGCAA GACGGTCTAC GCCCGCGACG AGGCCCACAA GGATGCGCTG CTCAAGAGCG AGTTCAACGC CAACGCCAAG GTCGATGTCG GCCGGTTCAA AGGGCTGGGC GAGATGATGC CGGCGCAGCT CAAGGAAACC ACGATGGATC CCGCCAAGCG CACGATGCTG CGGGTCATGC TGCTTGCGGA AGATCGCGAG GACACGGCGG ATTCAGTCGA GCGGTTGATG GGCACCAAGG CGGAGGCGCG CTTCGCCTTC ATTTCGGACA AGGCTGTATT CGCCAGCGAG GACATGCTGG ACGTTTAA
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Protein sequence | MVKSLKSNIK KKQADDLFAA SETKGRSSAR APGRASGAEA DYTAADIEVL EGLEPVRRRP GMYIGGTDEK ALHHLFAEVI DNAMDEALAG HATFIVVELA ADGFLTVTDN GRGIPVDPHP KFPKKSALEV IMCTLHSGGK FDSKVYETSG GLHGVGVSVV NALSSHLEVE VARSQNLYRM TFERGHPKGK LEDLGRIANR RGTTIRFKPD TEIFGAKAAF KPQRLFKMTR SKAYLFGGVE IRWRCAPELL KGLEDLPPEA TFHFPGGLKD YLAAAIHKDT LVHPDIFSGR SGRNGAHGAC EWAVAWTADA DGFLSSYCNT VPTPDGGTHE SGLRSALLRG LKDHAERVGQ GKRAGSITSE DVMVGAAVML SVFVREPEFQ GQTKDRLATA EASRIVEQAI KDPFDHWLSG NPAQANRLLD FVIERADERL RRRAEKETSR KSAVKKLRLP GKLADCTNTA TEGSELFIVE GDSAGGSAKQ ARDRKTQAVL PLRGKILNVV SATRDKVTAN AQLADLIQAL GCGTGTNYRE EDLRYSRVII MTDADVDGAH IASLLITFFY RQMPRLIDEG HLYLAVPPLY RLTHGSKTVY ARDEAHKDAL LKSEFNANAK VDVGRFKGLG EMMPAQLKET TMDPAKRTML RVMLLAEDRE DTADSVERLM GTKAEARFAF ISDKAVFASE DMLDV
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