Gene Nwi_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1650 
Symbol 
ID3674635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1793436 
End bp1795265 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content62% 
IMG OID637713208 
ProductPoly(R)-hydroxyalkanoic acid synthase, class I 
Protein accessionYP_318263 
Protein GI75675842 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID[TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.982303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC TCCAAGACGC GTCCATGAGC GAGGTATCCG CCGAGGCCAA GCCGACGAAG 
GGGTTCGACT CCGACGCATT CGCGATGAAT CTCGCGAGTG CTATGGAGAA CGGCGGCAGG
GCGCTGGCCG CGTATCTCAA GGCCCGGGAG CAGAAGCAGA CCCCCGACAA CCCGCCTACC
GAGTTTGCCG AACTGATCAA GACCGTCAGC GCGGTCTCCG AATACTGGCT GTCGGACCAG
GCCAGGGCCG TCGATTTACA GGCCCGGCTT GGCAAGTCCT ATCTGGAACT CTGGGGTTAC
GCTGCGCGCC GCCTTGCCGG CGAGGAGGTC GAGCCAGCGA TCGAACCCGA TCCGCGCGAC
AAGCGCTTCG CCGACCCGGA ATGGCGGTCG AACCTGCTGT TCAACTTCCT GATGCAGGCG
TATCTGCTGA CGACCAAATG GACCAACGAA CTGGTGCGCG ACGCCCACGG CCTCGATCCC
CATACCCGCA AGAAGGCTGA GTTCTATATC ACGCAGCTCA CCAACGCGGC CGCGCCGTCC
AATTTCGTGA TGACCAACCC CGAAGTGCTC CGCGAGACCT TCGCCTCCAA CGCCGACAAT
CTGGCGCGCG GCATGAAGAT GCTGGCGGAA GACATCGAGG CTGGCCGGGG CGTGTTGCGC
ATCCGCCAAT CCGACTCCGC TGGACTCGCC GTCGGCGTCA ACCTGGCGAC GACGCCCGGT
AAGGTGATCT ACCAGAACGA ACTGATGCAA TTGATCCAGT ATTCACCGAG CACCGAAAAC
GTGCTGCGGA CGCCGCTTTT GATCGTGCCG CCATGGATCA ACAAATTCTA CATCCTCGAT
CTCACGCCGG AGAAGTCCTA CATCAGGTGG TGCGTGGATC AGGGCATCAC CGTGTTCGTG
ATCTCCTGGG TCAACCCGGA CGGACATCTC GGGGAAAAGA CCTTCGAGGA CTACATGAAG
CAAGGTCCGC TGGCCGCGAT GGACGCCATC GAAAAGGCCA CCGGAGAAAC GAAGGTCCAT
ACCGCGGGTT ACTGCGTCGG CGGCACCCTG CTTGCCGCCA CGCTGGCATG GCTTGCGAAC
AAGCGGCGGC AGCGCGTGCG GTCGGTGACC TTCTTCGCCG CTCAGGTGGA CTTCACCCAT
GCCGGCGATC TGCTGGTATT CGCCGATGAG GATCAGATCT CCGCGCTCGA ACGCGACATG
AAGCGGTCCG GCGTGCTGGA AGGCAGCAAG ATGGCGATGA CCTTCAACAT GCTGCGCTCC
AACGACCTGA TCTGGCCCTA CGTCGTCAGC AATTATCTCA AGGGCAAGGC GCCATCCGCC
TTCGATCTCC TGCACTGGAA TTCAGACGCC ACGCGGATGC CGGCCGCCAA CCACTCGTTT
TATCTGCGCA ACTGCTATCT CGAGAACCGC CTTTCAACCG GCTCGATGGT GCTCGACAAT
ACCTTGCTCG ACCTTTCCAG GGTCAGGGTG CCGGTCTACA ATCTCGCGAC CCGCGACGAT
CACATCGCGC CGGCGGAATC CGTGTTGTAC GGCTCGCGTT TTTTTGGCGG GCCGGTGCGC
TTCGTTCTGG CGGGATCGGG CCACATCGCA GGTGTGATCA ATCCGCCCTC GCGCGGCAAA
TACCAGTATT GGACCAACGA CGGGATCAGC GACAAAACCC TCGCCCAGTG GATGCAGGAC
GCGCAGGAGC ACAAGGGCTC GTGGTGGCCG GACTGGCTCG CATGGCTGCG AAACATCGAC
GGCAAGGAGG TTCCGGCGCG CGAGGTCGGA ACCGGCGCGC TGTCGCCGAT CGAGGACGCG
CCGGGCAGCT ATGTGCGCGT GCGTGCTTGA
 
Protein sequence
MSKLQDASMS EVSAEAKPTK GFDSDAFAMN LASAMENGGR ALAAYLKARE QKQTPDNPPT 
EFAELIKTVS AVSEYWLSDQ ARAVDLQARL GKSYLELWGY AARRLAGEEV EPAIEPDPRD
KRFADPEWRS NLLFNFLMQA YLLTTKWTNE LVRDAHGLDP HTRKKAEFYI TQLTNAAAPS
NFVMTNPEVL RETFASNADN LARGMKMLAE DIEAGRGVLR IRQSDSAGLA VGVNLATTPG
KVIYQNELMQ LIQYSPSTEN VLRTPLLIVP PWINKFYILD LTPEKSYIRW CVDQGITVFV
ISWVNPDGHL GEKTFEDYMK QGPLAAMDAI EKATGETKVH TAGYCVGGTL LAATLAWLAN
KRRQRVRSVT FFAAQVDFTH AGDLLVFADE DQISALERDM KRSGVLEGSK MAMTFNMLRS
NDLIWPYVVS NYLKGKAPSA FDLLHWNSDA TRMPAANHSF YLRNCYLENR LSTGSMVLDN
TLLDLSRVRV PVYNLATRDD HIAPAESVLY GSRFFGGPVR FVLAGSGHIA GVINPPSRGK
YQYWTNDGIS DKTLAQWMQD AQEHKGSWWP DWLAWLRNID GKEVPAREVG TGALSPIEDA
PGSYVRVRA