Gene Nwi_1585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1585 
Symbol 
ID3676751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1730712 
End bp1731638 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content61% 
IMG OID637713141 
Productpolysaccharide deacetylase 
Protein accessionYP_318198 
Protein GI75675777 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATGA CGGCGGTGCT GATTTCTGCA GGCGTGATTT CGTTGTGCGC AGCCACGGTT 
GCCTGGTCGC AGACACCGGC GCCCAAGGGA GCTCAGAACG CCGCGCCGGT TCCCGTGCGG
GCCAGCGGGC CGCAGGTCGC CTGTAACGGA AGCCCCGACG CGCTCGGTGT TGCGCGCGTG
GTCCAGATCG ACACGACCGG CGGTCCGGGC TTCGGTTTCG AGCATTTCAA GCAACTCGAC
TTCCTGCGGG ACAAGGAAGT GGTGTTGACG TTCGATGATG GCCCATGGCC CGGAAAAACG
CCCGCCGTGT TGAAGGCGCT TGCGGATCAA TGCACCACCG GCATCTTCTT CTCGATCGGC
AAGCACGCGA CATATCATCC CGAAATCTTG CGGAATGTCG CCGCCGCAGG ACACACGATC
GGCGGTCACA CCTGGTCCCA CGCCAACCTC AACAACAAGA AGCTGTCCGA GGACCAGCGC
AAGGAAGAAA TCGAGAAAGG CTTCAGCGCC GTCAAATGGG CGCTCGAAGC TGAACCCGCG
CCGTTCTTCC GCTTTCCGGC GCTTCAGCAT CCGCCGGAAA TCGTGACGTA TCTGGGCGAA
CGCAATGTCG CGATTTTCTC CTGCGACGTC GACTCGTTCG ACTTCAAGAC CCGCAATGCC
GAACAGGTGG TCACCAACAT CTTCAAGAAA CTGGACAAGG TCGGCAAGGG CATCATCCTG
ATGCACGATT TTCAGAAGCA TACGGCGGAG GCGCTTCCTG AGATTCTGCG CAGGCTCAAG
GCGGGCGGCT ACAAGGTGGC GCAGATGAAG GCCAAGGCCC CGATCCAGAC GCTTGCGCAA
TATGACGAGG CGCTGAAGAA GGATACCAAG CTCCCGACCG TGAGCACGCG CCCGATCGAT
AGCGTAGTCC AGACCATCTC CGAGTAG
 
Protein sequence
MRMTAVLISA GVISLCAATV AWSQTPAPKG AQNAAPVPVR ASGPQVACNG SPDALGVARV 
VQIDTTGGPG FGFEHFKQLD FLRDKEVVLT FDDGPWPGKT PAVLKALADQ CTTGIFFSIG
KHATYHPEIL RNVAAAGHTI GGHTWSHANL NNKKLSEDQR KEEIEKGFSA VKWALEAEPA
PFFRFPALQH PPEIVTYLGE RNVAIFSCDV DSFDFKTRNA EQVVTNIFKK LDKVGKGIIL
MHDFQKHTAE ALPEILRRLK AGGYKVAQMK AKAPIQTLAQ YDEALKKDTK LPTVSTRPID
SVVQTISE