Gene Nwi_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1568 
SymboluvrA 
ID3676772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1711725 
End bp1714706 
Gene Length2982 bp 
Protein Length993 aa 
Translation table11 
GC content62% 
IMG OID637713124 
Productexcinuclease ABC subunit A 
Protein accessionYP_318181 
Protein GI75675760 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.524179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAG TCATAAAGGC CAAGCGGCAA CAATCGAGCC CCGCGAGTCG CGCCATCACG 
ATCCGCGGCG CGCGCGAACA CAATCTGAAG AACGTCGATC TGGAGATCCC GCGCGATAAG
CTGGTGGTGT TCACCGGCCT TTCCGGCTCC GGCAAGTCCT CGCTGGCGTT CGACACCATC
TATGCCGAAG GCCAGCGGCG CTATGTCGAG TCGCTGTCGG CTTACGCGCG TCAGTTCCTG
GAGATGATGC AGAAGCCCGA TGTCGATCAG ATCGACGGGC TGTCGCCTGC GATATCCATC
GAACAAAAGA CGACGTCGAA GAACCCGCGC TCCACCGTGG GAACCGTGAC GGAAATCTAC
GATTACATGC GGTTATTATG GGCGCGCGTC GGCGTGCCCT ATTCGCCCGC CACCGGCCTG
CCGATCGAGA GCCAGACGGT GTCGCAGATG GTTGATCGGG TTTTGGCGCT GCCTGATGGC
ACGCGGCTCT ATCTGCTGGC GCCGGTCGTT CGCGGCCGAA AGGGCGAATA TCGAAAAGAA
CTGGCGGAGT ATCTCAAGAA GGGCTTTCAG CGCGTCAAGA TCGATGGCTC GTTCCACGAG
CTCGCCGACG CTCCCGCGCT GGATAAGAAG TTTCCGCACG ATATTGACGT GGTGGTCGAT
CGCATCGTCG TCCGGCCGGA CCTAGGCCAG CGGCTGGCTG AGTCGTTCGA GACGGCCTTG
AAGCTCGCGG AAGGGCTGGC GGTGATCGAA TATGCGGATG CCCCTCCTCC GCTCCCCCAC
GGCGCGGGCG ACAAGAAGAA GGTCGCGAAG ATTCACGACA GGAGCGGGCC TGAACGCATC
CTGTTCTCGG AAAAGTTCGC GTGCCCCGTG TCCGGCTTCA CGCTTCCCGA GATCGAGCCG
CGGCTGTTTT CGTTCAATAA TCCCTACGGC GCTTGCCCGA AGTGCGGCGG TCTTGGTGTC
GAGCAGCATG TCGATGAAAA TCTGGTCATC CCCAACAGGG AATTGACACT GCGCAAAGGC
GCGATCGCAC CGTGGGCGAA ATCGTCGTCG CCGTACTACC TGCAGACGCT CACCGCGCTC
GGAAAATTCT ACAAGTTCGC TCTCGACACC AGATGGAAGG ATCTGCCGAA GAAGACGCAG
GCCGCGCTTT TGCATGGCTC GGGCGACAAC GAGATCAGGT TCTCCTATGA GGACGGCGTG
CGCTCCTATG AAACCAGGAA GCCGTTCGAA GGCGTGATCC CCAACATCGA GCGCCGTTAT
CGCGAGACCG AAAGCGAATG GGCGCGCGAG GAGCTCGGGA AGTATTTCTC CGATGTGCCG
TGCGATTCCT GCAAGGGCTA TCGACTCAAG CCGGAGGCGC TCTGCGTCAA GATCGGGGGC
AAGCACATCG GCGAGATCAG CGAACTGTCG GTTCGCGGCG CCGGCGAATG GTTCGAGACG
GTCCCGACAA TGCTCTCGGC GCAGCAGAAC GAAATTGCCG GTCGCGTCCT CAAGGAGATC
CGCGAACGGC TGTCGTTTCT GCTCGACGTC GGCCTTGGCT ATCTCACGCT GTCGCGCGCT
TCCGGCACGC TGTCCGGCGG CGAGAGCCAG CGCATTCGAC TTGCTTCGCA GATCGGCTCA
GGCCTCACCG GCGTGCTTTA TGTACTGGAC GAGCCGTCGA TCGGACTGCA CCAGCGCGAC
AATGCCCGCC TGCTTGAAAC CCTGAAGCGG CTGCGCAATC TCGGCAATAC CGTGATCGTT
GTCGAGCACG ACGAGGATGC CATCCGCCTC GCCGACCATG TGCTCGATAT CGGCCCCGGC
GCCGGTGTTC ACGGCGGCCA CATCGTCGCG CAGGGCACGC CGGCCGACAT CATGCGCAAT
CCCAGATCGC TGACCGGCAA ATATCTGACA GGCGAGCTGT CGGTCGAGAT ACCCGAGCGG
CGGCCGCCGA ACCATCGCCG CACCATCAAG CTGGTCAACG CGCGCGGCAA CAATCTGAAG
AACGTTACCG CGGAAATTCC GCTCGGCCTG TTCACCTGCA TCACCGGCGT CTCCGGCGGC
GGCAAGTCAA CGCTGCTGAT CGACACGCTT TACAAAGCGA TCGCGCGGAA GCTGAACAAT
GCGAGCGATC CCCCCGCGCC CCATGACCGT ATCGAAGGCC TGGAGCATAT CGACAAGATC
ATCGACATCG ACCAGTCTCC GATCGGGCGC ACGCCGCGCT CCAATCCCGC GACCTACACC
GGCGCCTTTA CGCCGATCCG CGAGTGGTTC GCCGGGTTGC CGGAAGCCAA GGCCCGCGGT
TATGCGCCCG GCCGCTTCTC GTTCAACGTC AAGGGCGGGC GTTGCGAGGC CTGCCAGGGC
GATGGGGTCA TCAAGATCGA GATGCACTTC CTGCCCGATG TTTATGTCAC CTGCGACGCC
TGCAAGGGCA AGCGCTACAA TCGCGAAACG CTTGAGGTGC TGTTCAAAGG CAAGTCGATT
TCGGACGTGC TCGACATGAC GGTCGAGGAA GCCGCCGAGT TTTTCAAGGC GGTGCCGCGC
GTGCGCGACA CCTTCTTGAC GCTGCAGCGC GTCGGCCTCG GCTACATCCG TGTGGGACAG
CAGGCGACCA CGCTGTCAGG CGGTGAAGCG CAGCGCGTCA AGCTCGCCAA GGAACTGTCG
AAGCGAGCGA CCGGCCGCAC GCTTTACATT CTCGATGAAC CGACAACCGG CCTGCATTTC
CATGACGTCA AGAAACTTCT TGAAGTGCTG CACGAACTGG TGGCGCAAGG GAACACGGTT
GCGGTGATCG AGCACAATCT CGAAGTCATC AAGACCGCGG ATTGGGTGAT CGATCTCGGC
CCCGATGGCG GCGACGGAGG CGGCGAGATT GTTGCCTGGG GAGCCCCGGA AGACATTGTG
AAAGCGCCGC GCAGCCATAC CGGAAAGTTC TTAAAGCCGA TTCTGGAAAA GGCAGGAAAG
CCAAGGCGGC ATAACCCGAA TGCGAGTGAA GCGGCCGAAT GA
 
Protein sequence
MDEVIKAKRQ QSSPASRAIT IRGAREHNLK NVDLEIPRDK LVVFTGLSGS GKSSLAFDTI 
YAEGQRRYVE SLSAYARQFL EMMQKPDVDQ IDGLSPAISI EQKTTSKNPR STVGTVTEIY
DYMRLLWARV GVPYSPATGL PIESQTVSQM VDRVLALPDG TRLYLLAPVV RGRKGEYRKE
LAEYLKKGFQ RVKIDGSFHE LADAPALDKK FPHDIDVVVD RIVVRPDLGQ RLAESFETAL
KLAEGLAVIE YADAPPPLPH GAGDKKKVAK IHDRSGPERI LFSEKFACPV SGFTLPEIEP
RLFSFNNPYG ACPKCGGLGV EQHVDENLVI PNRELTLRKG AIAPWAKSSS PYYLQTLTAL
GKFYKFALDT RWKDLPKKTQ AALLHGSGDN EIRFSYEDGV RSYETRKPFE GVIPNIERRY
RETESEWARE ELGKYFSDVP CDSCKGYRLK PEALCVKIGG KHIGEISELS VRGAGEWFET
VPTMLSAQQN EIAGRVLKEI RERLSFLLDV GLGYLTLSRA SGTLSGGESQ RIRLASQIGS
GLTGVLYVLD EPSIGLHQRD NARLLETLKR LRNLGNTVIV VEHDEDAIRL ADHVLDIGPG
AGVHGGHIVA QGTPADIMRN PRSLTGKYLT GELSVEIPER RPPNHRRTIK LVNARGNNLK
NVTAEIPLGL FTCITGVSGG GKSTLLIDTL YKAIARKLNN ASDPPAPHDR IEGLEHIDKI
IDIDQSPIGR TPRSNPATYT GAFTPIREWF AGLPEAKARG YAPGRFSFNV KGGRCEACQG
DGVIKIEMHF LPDVYVTCDA CKGKRYNRET LEVLFKGKSI SDVLDMTVEE AAEFFKAVPR
VRDTFLTLQR VGLGYIRVGQ QATTLSGGEA QRVKLAKELS KRATGRTLYI LDEPTTGLHF
HDVKKLLEVL HELVAQGNTV AVIEHNLEVI KTADWVIDLG PDGGDGGGEI VAWGAPEDIV
KAPRSHTGKF LKPILEKAGK PRRHNPNASE AAE