Gene Nwi_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1541 
Symbol 
ID3676369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1686140 
End bp1687627 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content59% 
IMG OID637713096 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_318154 
Protein GI75675733 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGGC GTGACATTCG GCGGCGTTAC TTTTCAAAGA ACTTCAGGGT CTGTCCGCCG 
TCAGGGCTCT TGAGACAGTT TAGGAGTTTT CGGGAAGGGA GGATTTCTGG ATCATCGCAG
CCAATTTGGA GCGCAGATGA GACAGAAATC CGGACCAGGC AAAGCGCCGG CAGAACAGGT
GCTGAAGGAC ATCCGACGGC AGACGCGCCG GCATTATTCG GCGGAGGAGA AGATCCGTAT
CGTGCTGGAA GGACTGCGCG GCGAGGAGAA CATCTCCGAG CTTTGCCGCC GCGAAGGCAT
CGCCGCCTCG ATGTATTACG GTTGGTCCAA GGAGTTCCTG GAAGCCGGCA AGCGCCGGTT
GGCGGGCGAC ACGGCACGTG CCGCAACCTC TGGCGAGGTG AAAGATCTTC GTCGGGAAGC
CTCGGCGTTG AAGGAAGTCG TCGCCGATCT CACCCTGGAG AACCGTCTGC TAAAAAAAAG
CATGAACGGG GATGGGGAGA ACGAGGCATG AGGTATCCTG CGTCCGAGAA AGCCGAGATC
ATCGCGTTGG TGGAGCAGTC GCATTTGCCG GCCAAACGCA CGCTGGACAA GCTCGGCATC
CCCCGCGCCA CGTTTTATAG ATGGTACGAT CGCTACCGCG CGGGCGGCAT TGAGGCCCTG
GCAGATCACC GCTCTCGACC GGATCGGGTC TGGAATCGTA TCCCGGATGA CGTCCGCGGC
CAGATCATCG ACCTGGCATT GGAGCTTCCG GAACTATCGC CGCGAGAGCT CGCCGTGCGG
TTTACCGACG AGAGAAAGTA CTTTGTCTCG GAGGCTTCGG TCTATCGGCT GCTGAAGGCG
CACGACCTCA TCACCAGTCC GGCCTATGTA GTGATCAAGG CGGCGAACGA GTTCAAGGAC
AAGACCACCG CCGCCAACCA GCTCTGGCAG ACCGACTTCA CCTACCTGAA GATCACCGGC
TGGGGCTGGT ACTATCTATC GACGGTGCTC GACGACTTCT CGCGCTACAT CGTCGCCTGG
AGGTTAGGTC CCACGATGTG TGCCTCCGAC GTCACGGCTA CGCTCGATCA GGCACTGGCC
GCCTCTGGTC TGGATCACGT CAGCGTCAGG CAGCGGCCCC GGCTTCTCAG CGACAATGGT
TCGAGTTACG TCGCGGATGA TCTGGCCACG TGGCTCAGGG CCAAGGACAT GCAGCATGTG
CGCGGAGCGC CGTATCATCC TCAGACTCAG GGCAAGATCG AGCGTTGGCA TCAAACGTTG
AAGAACCGCA TCCTGCTTGA GAACTACTAT TTACCGGACG ACCTCAAACG TCAGGTCGCC
GCGTTCGTCG AACACTATAA TCATGACCGC TACCACGAGA GCATCGGCAA CGTTACACCT
GCCGACGTCT ACTTCGGCAG GGCTGAGACA ATCCTCGCCG AACGACACCG CATCAAGCGC
GACACCATCG CAAACCGTCG CTTGCAGCAT CAGCTGCAGG CCGCTTAA
 
Protein sequence
MQGRDIRRRY FSKNFRVCPP SGLLRQFRSF REGRISGSSQ PIWSADETEI RTRQSAGRTG 
AEGHPTADAP ALFGGGEDPY RAGRTARRGE HLRALPPRRH RRLDVLRLVQ GVPGSRQAPV
GGRHGTCRNL WRGERSSSGS LGVEGSRRRS HPGEPSAKKK HERGWGERGM RYPASEKAEI
IALVEQSHLP AKRTLDKLGI PRATFYRWYD RYRAGGIEAL ADHRSRPDRV WNRIPDDVRG
QIIDLALELP ELSPRELAVR FTDERKYFVS EASVYRLLKA HDLITSPAYV VIKAANEFKD
KTTAANQLWQ TDFTYLKITG WGWYYLSTVL DDFSRYIVAW RLGPTMCASD VTATLDQALA
ASGLDHVSVR QRPRLLSDNG SSYVADDLAT WLRAKDMQHV RGAPYHPQTQ GKIERWHQTL
KNRILLENYY LPDDLKRQVA AFVEHYNHDR YHESIGNVTP ADVYFGRAET ILAERHRIKR
DTIANRRLQH QLQAA