| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1529 |
|---|
| Symbol | |
|---|
| ID | 3676554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 1668890 |
|---|
| End bp | 1669930 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637713083 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_318142 |
|---|
| Protein GI | 75675721 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.202985 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGCG TATTTACTGC TATTTTCGCT ATCGTTGCTG GTATTTCATT ACAACCGGCA
TCCGCGCAGG AGCAGGAATC CGCGAAGGCG AAGACCACGC TCGAAGCAGT CAAGGCGCGA
GGCGCGCTGT CGTGCGGCGT CAGTCAGGGG TTGCCGGGCT TCTCCGCCCC TGACGACAAA
GGAAACTGGA CGGGCCTCGA CGTGGACATC TGCCGCGCGA TCGCGGCCGT GGTGTTCAAC
GATCCCACCA AGGTCAAGTT TGTTCCGCTG TCCGCGAAAG ACCGGTTTAT CGCCCTGCAA
TCCGGCGAAA TCGATGTGCT GTCGCGCGAC ACCACATGGA CGCTCTCGCG CGACACGTCG
CTCGGAGCCA ATTTCACCGG CGTGACATAC TACGACGGAC AAGGCTTCCT GATCAGGAAG
TCCCTCAAGG TGAACTCGGC GCTGGAATTG AACAGCGCAT CGGTCTGCGT TCAGACCGGC
ACCACGAACG AACAGAATCT CGCCGATTAT TTCAAAAGCA ACAAGATGAA GTACGAGGTC
ATTGCATTCA GCACCGCCGA CGAGACCATA AAGGCCTACG AATCCGGCCG GTGCGATGTG
TTCACTTCGG ATATTTCACA GCTCTACGCC CAGCGGCTGA AGCTCATTAA TCCCGCCGAT
CATGCGGTTC TGCCGGAGGT CATCTCGAAG GAGCCGCACG CGACGATGGT GCGTCACGGC
GATGACCAGT GGTTCGATCT CGTGAAGTGG ACGCTGTTTG CGATGATCAA TGCCGAAGAA
CTCGGCATCA CGAAGAAGAA CGTTGACGAA ATGGCCAGAT CCGAGAATCC CGAACTCAAG
CGCATATTCG GAACAGACGG CAATTTCGGC GAGCAGCTCG GCGTCACCAA GGATTGGGTT
TCGCGAATCA TCAAGGCCGT CGGCAACTAT GGCGAATCGT TCGATCGCAA CGTCGGCGCC
GGCTCGCCGC TCGGGATCGC GCGAGGACTC AACAAGCTCT GGAATCAGGG CGGAATCATG
TACGCGCCGC CGATCCGCTA G
|
|---|
| Protein sequence | MKCVFTAIFA IVAGISLQPA SAQEQESAKA KTTLEAVKAR GALSCGVSQG LPGFSAPDDK
GNWTGLDVDI CRAIAAVVFN DPTKVKFVPL SAKDRFIALQ SGEIDVLSRD TTWTLSRDTS
LGANFTGVTY YDGQGFLIRK SLKVNSALEL NSASVCVQTG TTNEQNLADY FKSNKMKYEV
IAFSTADETI KAYESGRCDV FTSDISQLYA QRLKLINPAD HAVLPEVISK EPHATMVRHG
DDQWFDLVKW TLFAMINAEE LGITKKNVDE MARSENPELK RIFGTDGNFG EQLGVTKDWV
SRIIKAVGNY GESFDRNVGA GSPLGIARGL NKLWNQGGIM YAPPIR
|
|---|
| |