| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1523 |
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| Symbol | |
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| ID | 3676548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 1661048 |
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| End bp | 1662421 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637713077 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_318136 |
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| Protein GI | 75675715 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.116484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTTTA GACCAGGCCT GGACGATACA GTGAAAGCAG CCGGCGACGG GCTGTCCGGC
GCGAGAGCGG CGAGCGACCG TCGGCGTCCC CTGCGGATCG CCATCACGCT CCTGATCGTC
GGAGGGCTAG CCTATCTCGG CTGGACCTCG TTTGCTCAGA AGAAGCGCGA TGGAAGCTGG
GAACGTCCCG ATCGCGCGGT TCCGGTACTG GCGGCGACGC CGCGCATCCA GGACGTGCCG
GTCTACCTGG ACGGCGTCGG AGCCGTCCGC GCGCTAAGCA CCGTGACAGT ACGCTCCCAG
GTCAACGGCA AGCTGATCGC CGTCAATTTC ACCGAAGGCC AGGACGTCAA GAAAGGCGAC
GTGCTGGGCG AAATCGAGCC CGTGATCTAT CAGGCCCAGT ACGATCAGGC GGTCGCGAAG
AAGGCGCAGG ACGAAGCGCA ACTCGCCAAT ATGCGCCTCG ATCTGAAACG CTACGAGCAA
CTAGCCGCCT CCAACGCCGG TTCGAAGCAG CAGGCGGATA CCCAGAGGGC GGTCGTCGCG
CAGCAGGAGG CGCTGGTCAA GGCCGATCAG GCCGCCATCG ACAACGCGCA GGCGATGCTC
GGCTTCACCA GGATCGTCGC GCCGATTTCC GGTCGCGTGG GCCTGCGCCA GGTCGACCGC
GGCAACATCA TCAACGCCGC GGATGCGACC GGACTGGTCA TCATTACGCA GCTTCAACCC
ATCTCCGTCC AGTTCAGCCT TCCGCAACAG CAGATCACGC GCGTGAATGC AGCCGCCGCC
AAGGGTGAAA TCGAAGTCGA TGTATTCGGA AACGACGGCA CGACAGTCGT CGACACGGGC
AAGCTGATCG GCATCGATAA TCAGGTCGAT CCGACGACCG GCACATTGAG GCTGAGGGCC
GCATTTTCGA ATGAGCATTT TCAACTCTGG CCAGGCCAGT TCGTCAACGT ACGCATCAAG
GTTGAAACGC TGTCGCAAGC GACGGTGATC CCGACGTCGG CGGTGCAGCG AGGCCCGCTC
GGAACCTTCA GCTACGTGAT CGGCGACGAC GACATCGTGA AAGCCAGGCC GGTGACGGTG
CGGCAGCAGG ACGAAAAGGA CGCCGTGATC GCCAAGGGAA TTGCTCCCAC CGATCGCGTG
GTCACAACCG GATTCGCCAA TCTCTCCGAT GGCGCAAAGG TGACTGTCGG CCAGAGCGAT
CAGGTGCCGA CGGCCGATCT TGCGCCGCCG GCGCGGCAGG ACAGGCGCGG CGCTCGCCGG
GGCGGTGATG GCAGCGATCG TCGCGGCAGG CGGAGCGAGA GAGGACAGAA TCAATCGGGC
AGCGAGCCAC AGGAAAGCGG GCAGTCCGGC GCGGGACCGA AGCCTCGGCC ATAA
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| Protein sequence | MLFRPGLDDT VKAAGDGLSG ARAASDRRRP LRIAITLLIV GGLAYLGWTS FAQKKRDGSW
ERPDRAVPVL AATPRIQDVP VYLDGVGAVR ALSTVTVRSQ VNGKLIAVNF TEGQDVKKGD
VLGEIEPVIY QAQYDQAVAK KAQDEAQLAN MRLDLKRYEQ LAASNAGSKQ QADTQRAVVA
QQEALVKADQ AAIDNAQAML GFTRIVAPIS GRVGLRQVDR GNIINAADAT GLVIITQLQP
ISVQFSLPQQ QITRVNAAAA KGEIEVDVFG NDGTTVVDTG KLIGIDNQVD PTTGTLRLRA
AFSNEHFQLW PGQFVNVRIK VETLSQATVI PTSAVQRGPL GTFSYVIGDD DIVKARPVTV
RQQDEKDAVI AKGIAPTDRV VTTGFANLSD GAKVTVGQSD QVPTADLAPP ARQDRRGARR
GGDGSDRRGR RSERGQNQSG SEPQESGQSG AGPKPRP
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