Gene Nwi_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1487 
Symbol 
ID3674207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1618354 
End bp1619484 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content60% 
IMG OID637713039 
Productphage integrase 
Protein accessionYP_318100 
Protein GI75675679 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.16076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.536181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGTC ATATCCAGCA GCGCGGCAAA ACCTCTTGGC GTCTCAAGTT CGATGCAGGG 
CGCGACGAAA AGACGGGAAA GCGCAATGTT CAGTTCGTTA CATTCCGCGG CACCAAGCGC
CAAGCGCAGA CCAAACTGGC CGAGTTGATC GCATCGGTTG CGCAGTCGAA ATACATCGAA
CCAAGCAAGA TCACGGTGGC GGACTATGTG CGTGGTCGAG TTGACCAGTG GGAAGACTCC
GGCGACATCA GCGCCCGGAC GGCAGCAAGG TATCGTGAAC TGACCGAAAA TCAGATCGTC
CCGCACCTCG GCGCGAAACT GATCCAGAAG CTCCGCACCG ATGACATCGA GGAATGGCAC
ACCACACTGC GCAGCGGCGG CCGGGCGAAG GGCAAAGGCG GCTTGGCACC ACGGACGATC
GGCCACGCCC ACAGGGTACT TGGCAAGGCA ATGCGTGACG CGCTCCGCTT CGAAAAGATC
ACCAAGAACG TCACCGCTCT GCAGGCTGCT CCGAAGGTCG ACGATGACGA AATGGCCATC
GTGCAGGACG TCCCTGCCCT AATCGACCGG CTGCGCCACC ATCGGCTGTT CCCCTTGGCG
ATGATCGCCC TGTTTACAGG GATGCGGATC GGCGAGGTTC TGGCGCTCCG CTGGGGCCGG
GTCGACCTTG ATCGAAAGGT AATCGAGGTT CGCGAGGCAA TCGAGGAAAC CAAGGCTCAC
GGCATCCGAA TCAAGCCTCC AAAGACAAAG GCGGGACGAC GGGACGTCAC CCTGCCCGAC
GTTCTGGTCG ACGTGCTGCG CGACTATCGC AAAACCCATC TGGAACGACG GGTCGCGCTT
GGCTTGGGCA AGTTGCCCGA CGACGCGCTG CTATTCGCTG GGCCGGGCGG TTCCCTGCCC
TCCCAGAAGT ATTACAGCAA GGCGTGGAGC GATCTTGATG TCGGCGTGCC GTTCCATGGG
CTGCGCCATA CCCATGCGAG CCAGCTTATC GACGCCGGCG TGGATATCGT CACGATTTCC
AAAAGGCTGG GCCACGCCAA GCCCGATATC ACCTTGCGGA TTTATGCCCA CTTGTTCAGA
AAGGACGACA GCAAGGCTGC GGCGGCGATC AATGCGGCTT TCAATGGTTA G
 
Protein sequence
MKGHIQQRGK TSWRLKFDAG RDEKTGKRNV QFVTFRGTKR QAQTKLAELI ASVAQSKYIE 
PSKITVADYV RGRVDQWEDS GDISARTAAR YRELTENQIV PHLGAKLIQK LRTDDIEEWH
TTLRSGGRAK GKGGLAPRTI GHAHRVLGKA MRDALRFEKI TKNVTALQAA PKVDDDEMAI
VQDVPALIDR LRHHRLFPLA MIALFTGMRI GEVLALRWGR VDLDRKVIEV REAIEETKAH
GIRIKPPKTK AGRRDVTLPD VLVDVLRDYR KTHLERRVAL GLGKLPDDAL LFAGPGGSLP
SQKYYSKAWS DLDVGVPFHG LRHTHASQLI DAGVDIVTIS KRLGHAKPDI TLRIYAHLFR
KDDSKAAAAI NAAFNG