Gene Nwi_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1466 
Symbol 
ID3675555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1598811 
End bp1599650 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content62% 
IMG OID637713018 
Productrare lipoprotein A 
Protein accessionYP_318079 
Protein GI75675658 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.515787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAAAT CAGGTTCAGA TCGAATCCGG CTTGCTGCGC GTGCCTTAGC CGCCGCAGGC 
GCATGTCTGA TGCTCGCCAA TTGCGGCTCA TCGAGCAAAC TCAGCCGGAT TGACCCGAAG
TACGGCGTTT CGAGCAGTCC TCGGGTGGTT GCCTCGGGCG ACACGGTGCC AAAAGGCGGC
GGGACTTACC GGATCGGCAA GCCCTATACG GTCGCCGGAC GTGTTTACGT TCCCCAGGAA
AACACCAAAT ACAAAGCCGA AGGGCTCGCG TCCTGGTATG GCGACGCCTT CCATGGCCGC
CTGACAGCCA ACGGCGAGGT TTTCGACATG GCTTCGCTGT CTGCCGCGCA TCCGACCCTT
CCGTTGCCGT GCTATGTCCG GGTCACAAAC CTCGGCAACA GCAAATCCCT GGTCGTCCGC
GTCAACGATC GCGGACCGTA TCACGGTAAC CGGCTGATCG ATGTCTCGAA CAAGGCGGCC
GAATTGCTGG AGTTCAAGCG AAATGGCGTC GCGCCGGTGC GGGTCGAATA TGTCGGACGC
GCGCCACTTG AAGGTTCTGA CGATCGGCAA TTGATGGCGA CCTTGCGAAC GGGCGTTCCC
GCGCCGTCGC CGTCCACCGT CAGGGTCGCC TCGGCGCGGC CGTTTGTTCC TGAACTCCGG
CCGTCGATCG GCGAAACCTC CGCGTCCAGC CGTGTCTCGA CGCATCGACA GGAATCTGAT
GGTCGGCGAG AGGTTTCATA CGGTGAGGGC GATGTTACGG GCCGTGTCCA CCCGGTCGCC
GCTTATGCGC CGGCGGACCA GAGCGGACCG AGCGAATTCT CGGCCCGAGG GCTCTATTAA
 
Protein sequence
MGKSGSDRIR LAARALAAAG ACLMLANCGS SSKLSRIDPK YGVSSSPRVV ASGDTVPKGG 
GTYRIGKPYT VAGRVYVPQE NTKYKAEGLA SWYGDAFHGR LTANGEVFDM ASLSAAHPTL
PLPCYVRVTN LGNSKSLVVR VNDRGPYHGN RLIDVSNKAA ELLEFKRNGV APVRVEYVGR
APLEGSDDRQ LMATLRTGVP APSPSTVRVA SARPFVPELR PSIGETSASS RVSTHRQESD
GRREVSYGEG DVTGRVHPVA AYAPADQSGP SEFSARGLY