Gene Nwi_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1465 
Symbol 
ID3675554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1597446 
End bp1598687 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content63% 
IMG OID637713017 
Productpeptidase S11, D-alanyl-D-alanine carboxypeptidase 1 
Protein accessionYP_318078 
Protein GI75675657 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA GATCTTCCAC GCCCGACAGA CGCGGGGGGC TCGCCTGGCG CGGTCTGGTA 
GCCGCCGCCA TCCTCACGAT CAGCCTCGAC GGAGTCGTGC TGGCTGCGAA CAACAGCGTC
CAGGGAGCGA AGAAAGAAGA TATCTACGAA ACCAGCGCCC CGACCGCAAT TCTGCTCGAA
GCCAAAAGCG GTAGCGTGCT TTTCGAGAAG AACGCAGATG AACTGCGTGC ACCGTCCAGC
ATGATGAAGC TGATGACGGC GGAAGTCGTT TTCAACGCCG TCACAAAAGG CGAGATCAAG
CTCACGGACG AATACGTCAT CAGCGAAAAC ACCTGGCGAA AGGGCGGGGC GCCCTCCGGC
GGATCAACGA TGTTCGCGGC GATCAACAGC CGCATCCCTG TCCAGGACCT CCTGCGCGGC
GCGATCATCC AGAGCGGAAA CGACTCCTGC ATGGCGCTCG CGGAGGGCAT CGCCGGCCAC
GAAAGCGCCT TCGCGGAAAA GATGACGGCG CGCGCGCGGG AATTGGGCAT GAGCCGTTCC
ACCTTCGCCA ATTCCAGTGG TCTGCCGCAT CCCGACAACA AGATGACCGT TCGGGAGCTT
GCGGCGCTGG CGCGCCACAT CATCCTGACA TACCCGGATT TTTACAAGCT GTTCGGCGAG
CGCGAATTCA CCTGGAACAA GATCCGCCAG TCAAACCGCA ACGCGCTTCT CGCCGCGATG
GATGGGGCCG ACGGGCTCAA GACCGGCTAT ACCAAGGAGG GGGGATACGG CCTGGTCGGC
TCGGTGGTTC AGAACGGCAC GCGGCTGATC GTGGTCGTGA ACGGTCTCGA AAGCGCCGAC
TACCGGCTGA CCGCAGCCAG GAAATTGCTG GAATGGGGGT TTCGAAATTT CGAGGTCCGG
ACCCTGTTCG CCGCGGAACA GCCGATCGGC TACGCCAAGG TATTTGGCGG CGATAGCGGC
TCCGTTCAGG TGGCCGTGTC AGACCCGGTC CAGGTCATGG TTCAGAAGAA CGGCGGCGAC
AGGCTGATCG CGCGCATCGT TTATTCCGGG CCGGTCCGCG CGCCGATTGC GCCGGGGCAG
CCGATCGGCG TCGTCAGGGT GTGGCGAGGC AGGGAAGTAG CGGTGGAGAT GCCGGTTCAT
GCCACGAAAG CGGTTGGCAT CGGCTCGACC ATGCGCCGCG CGTTCGATGG AGTGATCGAG
CTTGTCGTCG GGACGGTGCG CTCAGGCGCC GCGAAACTCT GA
 
Protein sequence
MTTRSSTPDR RGGLAWRGLV AAAILTISLD GVVLAANNSV QGAKKEDIYE TSAPTAILLE 
AKSGSVLFEK NADELRAPSS MMKLMTAEVV FNAVTKGEIK LTDEYVISEN TWRKGGAPSG
GSTMFAAINS RIPVQDLLRG AIIQSGNDSC MALAEGIAGH ESAFAEKMTA RARELGMSRS
TFANSSGLPH PDNKMTVREL AALARHIILT YPDFYKLFGE REFTWNKIRQ SNRNALLAAM
DGADGLKTGY TKEGGYGLVG SVVQNGTRLI VVVNGLESAD YRLTAARKLL EWGFRNFEVR
TLFAAEQPIG YAKVFGGDSG SVQVAVSDPV QVMVQKNGGD RLIARIVYSG PVRAPIAPGQ
PIGVVRVWRG REVAVEMPVH ATKAVGIGST MRRAFDGVIE LVVGTVRSGA AKL