Gene Nwi_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1461 
Symbol 
ID3675200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1592768 
End bp1593559 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content62% 
IMG OID637713013 
ProductTatD-related deoxyribonuclease 
Protein accessionYP_318074 
Protein GI75675653 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTCG ACAGCCACTG CCATCTGGAC TTTCCCGATT TCGCCGATGA ACTCGACGCC 
GTGGTCGCGC GCGCTGAAGC GGCGGGGGTA GGGCGCATGG TGACAATTTC AACGCGGGTG
AGGGAGCAGG CGAAACTGCT CGCCATCGCG GAACGGTTTC CGGATGTCTA TTGCTCGGTC
GGCACCCATC CGCATCATGC CGACGAAGAG GGCGGCATTT CGATCGACGA ACTCATCGCG
CTGACACGCC ATCCAAAAGT CGCCGCGCTG GGAGAGGCGG GGCTGGATTA TTTCTACGAG
CACGGCTCGC ACGCTGCGCA GGCGCGGGGA TTCGGCACTC ACATCGCAGC CGCACGCGAG
ACCGGTTTAC CCTTGGTGAT CCACACCCGC GAGGCGGACG AGGACTGCGG TCATATCCTC
GATGAGGAAA TGGCGAAGGG CGCTTTTCGC GCCGTGCTGC ATTGCTACAC GGGTGGCCGC
GAACTCGCGA TGAAAGCGGT CGCGCTCGGA TTGTATATCG GCTTCACCGG AATTCTGACC
TTCAAGAAAT CCGACGCGTT GCGCGCGCTC GCCGCGGAAC TACCCGCAGA TCGCATCCTG
GTCGAGACCG ATGCACCGTA TCTTGCGCCT GGCAAGTTTC GCGGCAAGCG CAACGAGCCC
TCTTATGTCG TGGAGACCGC GAAGGTGTTG GCGGACGCGC GCGGCGTTTC ATTCGACGAC
ATCTCGCGAC AAACCACCGA GAATTTCTTT CGGCTGTTCT CCAAGGTACC GCATCCGGAC
GCCGCCGCAT GA
 
Protein sequence
MLVDSHCHLD FPDFADELDA VVARAEAAGV GRMVTISTRV REQAKLLAIA ERFPDVYCSV 
GTHPHHADEE GGISIDELIA LTRHPKVAAL GEAGLDYFYE HGSHAAQARG FGTHIAAARE
TGLPLVIHTR EADEDCGHIL DEEMAKGAFR AVLHCYTGGR ELAMKAVALG LYIGFTGILT
FKKSDALRAL AAELPADRIL VETDAPYLAP GKFRGKRNEP SYVVETAKVL ADARGVSFDD
ISRQTTENFF RLFSKVPHPD AAA