| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1445 |
|---|
| Symbol | |
|---|
| ID | 3675184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 1573418 |
|---|
| End bp | 1574857 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637712997 |
|---|
| Product | helix-turn-helix, Fis-type / nitrogen regulation protein NR(I) |
|---|
| Protein accession | YP_318058 |
|---|
| Protein GI | 75675637 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.871855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.9465 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCAG CCAACATACT TGTCGCCGAT GATGACGGAG CCATCCGCAC GGTGATCAAT
CAGGCGCTGT CGCGTGCCGG TTATGACGTG CGCCTGACCG GGAATGCCGC AACGCTGTGG
CGATGGGTCA GCCAGGGCGA AGGAGATATC GTGATCACCG ACGTGGTGAT GCCGGACGAG
AACGCCTTCG ACCTTCTGCC TCGCATCAAG AAAATCAGGC CGAACCTGCC GGTCATCGTG
ATGAGCGCGC AGAACACCTT CATGACGGCG ATCCGCGCCT CCGAGCGCGG CGCTTACGAA
TACCTTCCGA AACCGTTCGA CCTGAAGGAA CTGATCGCAA TCGTCGGCCG CGCGCTCGCC
GAGCCGAAGG AGAGCGCGGC CAGCCGCGGC GACGAGAATG AAGGCGATTC CCTGCCGTTG
ATCGGCCGGT CCCCCGCCAT GCAGGAAATC TACCGTGTTC TGGCGCGGCT GATGCAGACG
GACCTGACCG TGATGATTTC CGGCGAGTCC GGCACCGGCA AGGAACTTGT CGCGCGCGCG
CTTCATGACT ACGGCAAGCG TCGCGGCGGT CCGTTCGTCG CCGTCAATAT GGCGGCGATT
CCCCGCGACC TGATCGAATC GGAGTTGTTC GGTCACGAAC GCGGCGCATT CACGGGCGCG
AACGCCCGCG CGTCGGGCCG TTTCGAGCAG GCCGAAGGAG GGACTCTCTT TCTCGACGAA
ATCGGCGACA TGCCGATGGA GGCGCAGACA CGTCTGCTTC GTGTGCTTCA GCAGGGTGAA
TATTGCACCG TCGGGGGAAG GACGGCCATC AAGACGGATG TCCGCATCGT TGCGGCATCC
AACAAGGATC TTCGTGTCCT GATTCAGCAG GGGCTGTTTC GCGAGGATCT TTTTTTCCGC
CTCAACGTGG TGCCGCTGCG CCTGCCGCCG CTCCGCGAAC GCATCGAGGA TCTGCCGGAT
CTGATCAGGC ATTTTTTCGT GCTTGCCGAA AAGGATGGAC TGCCGCCCAA GAAGCTGGAC
GCGCTTGCGC TAGAACGCTT GAAGCGGCAC CGCTGGCCCG GCAACGTCCG GGAGCTTGAA
AACCTTGCGC GCAGGCTGGC CGCGCTCTAC CCGCAGGATG TCATCACCGC TCCGGTGATC
GATTGCGAGC TTGCATCTCC CGAGGCGACC TCCGGAAGTA ACGCCCAGAA CATCAATAGT
CTCGGTGGCG CCGTCGAGAT GTACATGTCG TCGCTTTTCT CAGGCTCCCC GAACGGGCTC
CCGCCGCCTG GCCTGTATCA ACGCGTTCTC AGGGAGATTG AGGTCCCGCT TCTCACCGCC
GTGCTGGCGG CGACGCGCGG CAACCAGATT CGCGCCGCCG ACCTTTTGGG TTTGAACCGC
AACACGCTCC GTAAAAAAAT CCGCGATCTG GATATCCAGG TCTACCGTTC CGGAGGATAG
|
|---|
| Protein sequence | MSPANILVAD DDGAIRTVIN QALSRAGYDV RLTGNAATLW RWVSQGEGDI VITDVVMPDE
NAFDLLPRIK KIRPNLPVIV MSAQNTFMTA IRASERGAYE YLPKPFDLKE LIAIVGRALA
EPKESAASRG DENEGDSLPL IGRSPAMQEI YRVLARLMQT DLTVMISGES GTGKELVARA
LHDYGKRRGG PFVAVNMAAI PRDLIESELF GHERGAFTGA NARASGRFEQ AEGGTLFLDE
IGDMPMEAQT RLLRVLQQGE YCTVGGRTAI KTDVRIVAAS NKDLRVLIQQ GLFREDLFFR
LNVVPLRLPP LRERIEDLPD LIRHFFVLAE KDGLPPKKLD ALALERLKRH RWPGNVRELE
NLARRLAALY PQDVITAPVI DCELASPEAT SGSNAQNINS LGGAVEMYMS SLFSGSPNGL
PPPGLYQRVL REIEVPLLTA VLAATRGNQI RAADLLGLNR NTLRKKIRDL DIQVYRSGG
|
|---|
| |