| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1442 |
|---|
| Symbol | |
|---|
| ID | 3677184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 1569792 |
|---|
| End bp | 1570988 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637712994 |
|---|
| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
|---|
| Protein accession | YP_318055 |
|---|
| Protein GI | 75675634 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.943672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.915684 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGCT CAAAACGAAC TGCCGCCATC ATTGTCGCCG CGGGCCGCGG TCTCCGCGCG
GGCGCGGGCG GCCCCAAACA ATACCGGACG ATTGGCGGAC GAACCGTGAT TTCGCGGGCG
ATGGAGGCGT TCTGCCAGCA TCCCGACGTG TTCGCGGTTC AGCCGGTGCT CAATCCCGAT
GACCTCTCGA TGTTCAATCA GGCCGCCGCC CAGTTCCGCT ATCGTCCGCC CGCGAATGGC
GGGGCCACGC GCCAGGCTTC CGTTCGCGCC GGCCTTGAGG CGTTAGCGGC CGACGCGCCG
GACATCGTGC TGATCCACGA CGCCGCCCGC CCGTTCGTCA CACCGGCGCT GATCACGCGC
GCCATCGACG CTGCCGATAA AGCCGGCGCG GCGGTGCCCG CTATTGCCGT TACCGACACC
ATCAAGCAGG TCGATGAATC CGGCGCGGTC AACGCGACCC CCGACCGTGC AAAGCTGCGG
ATCGCGCAGA CGCCGCAGGC GTTCCATTTC GATATGATAC TCGATGCGCA CCGCCGTGCG
GCGCGCGAGG GCCGCGACGA TTTCACCGAC GACGCCGCGC TCGCCGAGTG GGTGGGATTG
ACGGTGGCGA CATTCGAGGG CGATGCTGCG AACATGAAAC TGACGACTCC CGAAGATTTC
GTGCGTGAGG AAGCGCGTCT CGCGGCCGCT CTCGGCGACA TCAGAACCGG CACGGGCTAC
GACGTGCATG CTTTCGGCGA AGGCGATCAC CTCATGCTGT GCGGCGTGAA GGTGCCGCAT
AATTGCGGCT TCCTGGCGCA CTCCGATGGC GATGTCGGCT TGCACGCGCT GGTCGACGCC
ATTCTCGGAG CGCTCGCGGA CGGCGACATA GGCTCGCATT TCCCGCCCAG CGACCCGCAA
TGGAAAGGGG CGGCTTCCGA CAAATTTCTG AAGTATGCTG TCGACCGGGT TACGGCGCGC
GGCGGCCGCG TCGCCAATCT CGAGGTCACC ATGATATGCC AGCAGCCGAA GATCGGACCT
CTGCGCGACC AGATGCGGGC GCGCATCGCT GATATCACCG GGGTCGCCAT CTCGCGCATC
GCCGTGAAGG CGACGACCAG CGAACGGCTC GGCTTCACCG GACGCGAGGA AGGAATCGCG
GCGACTGCCA GCGCCACCAT CCGTCTGCCC TGGAACGACA AGGGCCGGGA CACCTGA
|
|---|
| Protein sequence | MPSSKRTAAI IVAAGRGLRA GAGGPKQYRT IGGRTVISRA MEAFCQHPDV FAVQPVLNPD
DLSMFNQAAA QFRYRPPANG GATRQASVRA GLEALAADAP DIVLIHDAAR PFVTPALITR
AIDAADKAGA AVPAIAVTDT IKQVDESGAV NATPDRAKLR IAQTPQAFHF DMILDAHRRA
AREGRDDFTD DAALAEWVGL TVATFEGDAA NMKLTTPEDF VREEARLAAA LGDIRTGTGY
DVHAFGEGDH LMLCGVKVPH NCGFLAHSDG DVGLHALVDA ILGALADGDI GSHFPPSDPQ
WKGAASDKFL KYAVDRVTAR GGRVANLEVT MICQQPKIGP LRDQMRARIA DITGVAISRI
AVKATTSERL GFTGREEGIA ATASATIRLP WNDKGRDT
|
|---|
| |