Gene Nwi_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1406 
Symbol 
ID3677044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1530650 
End bp1531711 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content63% 
IMG OID637712957 
Productputative glycerol-3-phosphate acyltransferase PlsX 
Protein accessionYP_318019 
Protein GI75675598 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.638492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGA AGGTTCGAAT CGCGCTTGAC GCCATGGGTG GCGATGTCGG CGCATCGGTG 
GTCATTCCCG GAGCCGCGAT TTCACTGAAC CGTCATCCCG ACACCGAGTT TCTGCTCTAC
GGTAACGGCG CTTTGATCGA AGCGCAGCTC GCCGCTCATC CGGCGATGAA AGCGGTGTCC
CGGGTGATCC ACACCGACGT CGCCGTCGGC ATGGACGACA AGCCGAGCCA GGCATTGCGT
CGCGGCCGCA AGACGTCGTC GATGTGGCTT GCGATCGATG CGGTGAAGAA AGGCGAAGCC
GATGTCGCGG TGTCGGCCGG CAATACCGGC GCACTGATGG CGATGGCGCG GTTCAACCTG
CGGACGCTAC CGGGAATCGA TCGTCCCGCG ATCGCGGCCG TATGGCCCAC CTTGCGCGGC
GATTCCGTTG TGCTCGATCT TGGCGCGACG ATCGGCGGAG ACGCACATCA CCTCGCGGCT
CTCGCCATCA TGGGCAGCGC GATGGCGCGT GTCCTGTTTG ATCTGGAACG GCCGACTGTC
GGCCTTCTCA ACATCGGCGT CGAGGAGGTC AAGGGCGGAG AGGAAATCCG CGAGGCGGCG
GAATTGTTGC GGTCGTTAAA TCTGCCGCAG CTCGACTTCA TCGGTTTCGT CGAGGGCGAC
GGGATCGGCA GGGGGGCCGC CGACGTCATC GTCACCGAGG GCTTCAGCGG CAATATCGCG
CTGAAGGCGG CCGAGGGAAC CGCGCGCCAG ATCGCCGAAT ATCTGCGCAG CGCGATGTCG
CGGACCCTTC TGTCGCGGAT CGGGTATCTG TTTGCGCGGG GCGCTTTCAA TGCGCTGCGC
GGCAAGATGG ATCCTCGGAA GTCCAATGGA GGCGTATTCC TCGGACTGAA CGGTATCGTG
GTCAAAAGCC ACGGCGGAAC CGATGCCGAA GGCTTTGCCT ACGCGGTCGA TGTTGGCTAT
GACATGGTTC GATACGATCT CCTCACCAAG ATCAACCAAA CGCTCAACCG CCACGGCCAC
ACCCTAGCTC CGGCGTCGGC AGTGCAGGAG GCTCTCTCTT GA
 
Protein sequence
MPQKVRIALD AMGGDVGASV VIPGAAISLN RHPDTEFLLY GNGALIEAQL AAHPAMKAVS 
RVIHTDVAVG MDDKPSQALR RGRKTSSMWL AIDAVKKGEA DVAVSAGNTG ALMAMARFNL
RTLPGIDRPA IAAVWPTLRG DSVVLDLGAT IGGDAHHLAA LAIMGSAMAR VLFDLERPTV
GLLNIGVEEV KGGEEIREAA ELLRSLNLPQ LDFIGFVEGD GIGRGAADVI VTEGFSGNIA
LKAAEGTARQ IAEYLRSAMS RTLLSRIGYL FARGAFNALR GKMDPRKSNG GVFLGLNGIV
VKSHGGTDAE GFAYAVDVGY DMVRYDLLTK INQTLNRHGH TLAPASAVQE ALS