| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1392 |
|---|
| Symbol | |
|---|
| ID | 3677030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 1517348 |
|---|
| End bp | 1518679 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637712943 |
|---|
| Product | recombination factor protein RarA |
|---|
| Protein accession | YP_318005 |
|---|
| Protein GI | 75675584 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCGA AGCGCCAGCA CGACTCCAGG AGCCTGTTCG CCGCGGCGGG CCTGGAGCGT
GATGCGCCGC ATCCGCTGCC GGACAGGCTG CGGCCGCAGA TGCTTTCGGA CGTCGTCGGG
CAGGATCACA TTCTGGGGCC GGACGGCGCG CTGACCCGGA TGCTGGAAAC CCGCACGCTG
GGCTCGCTCA TCTTCTGGGG ACCGCCGGGG ACCGGCAAGA CCACGGTGGC GCGGCTGCTG
GCGGACGCGA CCGCGCTGCA TTTCGAGCAA CTGTCGGCGG TGTTCTCCGG CGTCAATGAT
CTGAAGAAGG CATTCGAGGC CGCCCGCGCG CGCCGCGAGT CGGGGACGGG TACGCTTCTG
TTTGTCGACG AGGTGCATCG CTTCAATCGC GCGCAACAGG ATTCGTTTCT GCCTGTCATG
GAGGACGGAA CCGTCGTTCT GGTTGGCGCG ACCACCGAGA ACCCGTCGTT CGAACTCAAC
GCGGCGCTGT TGTCGCGGGC GCGCGTGCTG GTGTTTCGTT CGCTTGACGC GCTGGCGGTC
GAGAAATTGT TCGTCCGCGC CGAAGAGGTC GAGGGCAAGC CGCTGCCGCT TGATGCAGAA
GCGCGCGCGG CGCTGGTGCG CATGGCCGAC GGGGATGGGC GAGCGGCGCT CACGCTGGTC
GAGGAAGTCT GGCGGTCGGC GCGCGAGGGC GAGGTCTTCG ATGCCGGTCA GTTACAGGGC
GTGCTGCAAC GCCGCGCGCC GATCTACGAC AAATCCGCCG ACGGCCACTA CAACCTGATT
TCCGCCTTGC ACAAGTCGGT GCGGGGCTCC GATCCCGATG CGGCGCTGTA CTATCTGGCG
CGGATGATCG AGGCGGGCGA GGACCCGTTG TTTCTCGCGC GCCGCGTGGT GCGGATGGCG
GTGGAGGATA TCGGGCTTGC GGATCCTCAG GCGCTGGTGA TCTGCAACGC GGCCAAGGAT
GCCTATGATT TCCTCGGCTC GCCGGAAGGC GAACTCGCAA TCGCGCAGGC GGTGATCTAT
CTCGCGACCG CGCCGAAGTC CAACGCCGCC TACAAGGCGT TCGGCGCGGC GATGCGCGTC
GCGAAGGACG CCGGCTCTCT CTTGCCGCCG AAGCACATCC TGAACGCGCC GACCAAACTG
ATGAAATCCG AAGGTTATGG CGGCGGCTAT CAATACGATC ACGATATGCC GGACGCGTTT
TCCGGACAGG ATTACTTTCC GGAGACGCTC GGCCGCCAGA CCTTTTATGA TCCGCCGGAT
CGTGGGTTCG AGCGCGAAAT CCGCAAGCGA ATGGATTACT GGGCGAAACT GCGGCGGGAG
CGCGCGTCAT GA
|
|---|
| Protein sequence | MSPKRQHDSR SLFAAAGLER DAPHPLPDRL RPQMLSDVVG QDHILGPDGA LTRMLETRTL
GSLIFWGPPG TGKTTVARLL ADATALHFEQ LSAVFSGVND LKKAFEAARA RRESGTGTLL
FVDEVHRFNR AQQDSFLPVM EDGTVVLVGA TTENPSFELN AALLSRARVL VFRSLDALAV
EKLFVRAEEV EGKPLPLDAE ARAALVRMAD GDGRAALTLV EEVWRSAREG EVFDAGQLQG
VLQRRAPIYD KSADGHYNLI SALHKSVRGS DPDAALYYLA RMIEAGEDPL FLARRVVRMA
VEDIGLADPQ ALVICNAAKD AYDFLGSPEG ELAIAQAVIY LATAPKSNAA YKAFGAAMRV
AKDAGSLLPP KHILNAPTKL MKSEGYGGGY QYDHDMPDAF SGQDYFPETL GRQTFYDPPD
RGFEREIRKR MDYWAKLRRE RAS
|
|---|
| |