Gene Nwi_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1379 
SymbolrplF 
ID3677158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1507099 
End bp1507632 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content62% 
IMG OID637712930 
Product50S ribosomal protein L6 
Protein accessionYP_317992 
Protein GI75675571 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.803766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGCA TTGGCAAGAG GCCAGTCACG GTGCCGTCCG GTGTGACCGC GACCGTCGAA 
GGGCAGACCG TCAAGATGAA GGGGCCGAAA GGCGAGCTTC GATTTGTTGT CCATGATGAC
GTCGAGGTGA AGCTTGAGGA CGGTGCGGTG AAGGTCGCGC CACGATACGA GACCAAGCGG
GCGCAGGCGC TGTATGGCAC CGCGCGCGCG CAGGTCGCGA ATCTCGTCGC CGGCGTCACC
AAGGGGTTCG AGAAGAAGCT CGAGATCATC GGCGTCGGCT ATCGCGCGGC GTTGCAGGGC
AAGTCGTTGC AGCTCGCGCT CGGCTACAGT CACGATGTCA ATTACGCCGT CCCGGAGGGG
ATCACGATCG CTGTGCCGAA GCCGACCGAA ATCACGATCA CGGGCAATGA CGCGCAGCGC
GTCGGTCAGG TCGCGGCCGA AATCCGTGGC TATCGTCCGC CGGAGCCCTA CAAGGGCAAG
GGCGTGAAGT ACGCCGACGA AACGATCTTC CGCAAGGAAG GCAAGAAGAA ATAA
 
Protein sequence
MSRIGKRPVT VPSGVTATVE GQTVKMKGPK GELRFVVHDD VEVKLEDGAV KVAPRYETKR 
AQALYGTARA QVANLVAGVT KGFEKKLEII GVGYRAALQG KSLQLALGYS HDVNYAVPEG
ITIAVPKPTE ITITGNDAQR VGQVAAEIRG YRPPEPYKGK GVKYADETIF RKEGKKK