Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1379 |
Symbol | rplF |
ID | 3677158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 1507099 |
End bp | 1507632 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637712930 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_317992 |
Protein GI | 75675571 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.803766 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACGCA TTGGCAAGAG GCCAGTCACG GTGCCGTCCG GTGTGACCGC GACCGTCGAA GGGCAGACCG TCAAGATGAA GGGGCCGAAA GGCGAGCTTC GATTTGTTGT CCATGATGAC GTCGAGGTGA AGCTTGAGGA CGGTGCGGTG AAGGTCGCGC CACGATACGA GACCAAGCGG GCGCAGGCGC TGTATGGCAC CGCGCGCGCG CAGGTCGCGA ATCTCGTCGC CGGCGTCACC AAGGGGTTCG AGAAGAAGCT CGAGATCATC GGCGTCGGCT ATCGCGCGGC GTTGCAGGGC AAGTCGTTGC AGCTCGCGCT CGGCTACAGT CACGATGTCA ATTACGCCGT CCCGGAGGGG ATCACGATCG CTGTGCCGAA GCCGACCGAA ATCACGATCA CGGGCAATGA CGCGCAGCGC GTCGGTCAGG TCGCGGCCGA AATCCGTGGC TATCGTCCGC CGGAGCCCTA CAAGGGCAAG GGCGTGAAGT ACGCCGACGA AACGATCTTC CGCAAGGAAG GCAAGAAGAA ATAA
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Protein sequence | MSRIGKRPVT VPSGVTATVE GQTVKMKGPK GELRFVVHDD VEVKLEDGAV KVAPRYETKR AQALYGTARA QVANLVAGVT KGFEKKLEII GVGYRAALQG KSLQLALGYS HDVNYAVPEG ITIAVPKPTE ITITGNDAQR VGQVAAEIRG YRPPEPYKGK GVKYADETIF RKEGKKK
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