Gene Nwi_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1378 
SymbolrpsH 
ID3677157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1506629 
End bp1507027 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content59% 
IMG OID637712929 
Product30S ribosomal protein S8 
Protein accessionYP_317991 
Protein GI75675570 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.62644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.800261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGC ACGATCCGAT CAGCGATCTC ATCACCCGCA TTCGCAACGC GCAGATGCGC 
AGCAAGCCCA AGGTTTCGAC TCCGGGCTCG AAGATGCGCG CCAACGTGCT CGAGGTTCTC
AAAAGCGAAG GCTATATCCG TGGTTATGCC AGTGTCGAGC ATTCCTCGGG ACGCAGCGAG
CTTGAGATCG AGTTGAAGTA TTTCGACGGG GAGCCCGTGA TTCGCGAGAT CGAGCGCGTT
TCCAGGCCCG GCCGTCGCGT TTACGCCTCG GTGAAAAATC TACCCCGCGT CAACAACGGG
TTGGGAATCT CGGTGCTGTC GACGCCGAAG GGGATCATGG CTGACCACGA GGCGCGCGAC
GCCAATGTGG GCGGTGAAGT TCTCTTTACG GTGTTCTAG
 
Protein sequence
MSTHDPISDL ITRIRNAQMR SKPKVSTPGS KMRANVLEVL KSEGYIRGYA SVEHSSGRSE 
LEIELKYFDG EPVIREIERV SRPGRRVYAS VKNLPRVNNG LGISVLSTPK GIMADHEARD
ANVGGEVLFT VF