Gene Nwi_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1376 
SymbolrplE 
ID3677155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1505709 
End bp1506266 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content60% 
IMG OID637712927 
Product50S ribosomal protein L5 
Protein accessionYP_317989 
Protein GI75675568 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.526606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA CGGCTTACGT GCCGCGCCTG CGCGCGGAGT ATGACAAGAG CATCCGGTCC 
CGGCTGACCG AGCAGTTCGG CTATGTCAAC GTCATGCAGG TGCCTCGCCT CGACAAGGTG
GTTCTCAACA TGGGAATCGG CGAGGCCGTG AACGATCGTA AAAAGGCCGA GGCGGCGGCG
GGCGACCTGT CTTTGATCGC GGGCCAGAAG GCGGTCGTGA CTTACTCGCG TGTCGCCATT
TCGACCTTCA AGTTGCGTGA GAACCAGCCG ATTGGCTGCA AGGTGACGCT GCGCAAGACG
AAGATGTACG AATTCATCGA TCGTCTCGTG AACGTTGCGC TGCCGCGCGT CCGCGACTTC
CGTGGTCTCA ATCCGAAGAG CTTCGACGGT CGCGGCAATT ACTCGCTCGG CATCAAGGAA
CACATCATTT TCCCGGAGAT CGATTTCGAC AAGGTCGGGG AAAGCTGGGG CATGGACGTC
ACGGTCTGCA CGACCGCGCA GACGGACGAC GAGGCCCGGG CGCTGCTGAC AGCATTCAAT
TTTCCGTTCC GGCAGTGA
 
Protein sequence
MAETAYVPRL RAEYDKSIRS RLTEQFGYVN VMQVPRLDKV VLNMGIGEAV NDRKKAEAAA 
GDLSLIAGQK AVVTYSRVAI STFKLRENQP IGCKVTLRKT KMYEFIDRLV NVALPRVRDF
RGLNPKSFDG RGNYSLGIKE HIIFPEIDFD KVGESWGMDV TVCTTAQTDD EARALLTAFN
FPFRQ