Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1376 |
Symbol | rplE |
ID | 3677155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 1505709 |
End bp | 1506266 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637712927 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_317989 |
Protein GI | 75675568 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.526606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGA CGGCTTACGT GCCGCGCCTG CGCGCGGAGT ATGACAAGAG CATCCGGTCC CGGCTGACCG AGCAGTTCGG CTATGTCAAC GTCATGCAGG TGCCTCGCCT CGACAAGGTG GTTCTCAACA TGGGAATCGG CGAGGCCGTG AACGATCGTA AAAAGGCCGA GGCGGCGGCG GGCGACCTGT CTTTGATCGC GGGCCAGAAG GCGGTCGTGA CTTACTCGCG TGTCGCCATT TCGACCTTCA AGTTGCGTGA GAACCAGCCG ATTGGCTGCA AGGTGACGCT GCGCAAGACG AAGATGTACG AATTCATCGA TCGTCTCGTG AACGTTGCGC TGCCGCGCGT CCGCGACTTC CGTGGTCTCA ATCCGAAGAG CTTCGACGGT CGCGGCAATT ACTCGCTCGG CATCAAGGAA CACATCATTT TCCCGGAGAT CGATTTCGAC AAGGTCGGGG AAAGCTGGGG CATGGACGTC ACGGTCTGCA CGACCGCGCA GACGGACGAC GAGGCCCGGG CGCTGCTGAC AGCATTCAAT TTTCCGTTCC GGCAGTGA
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Protein sequence | MAETAYVPRL RAEYDKSIRS RLTEQFGYVN VMQVPRLDKV VLNMGIGEAV NDRKKAEAAA GDLSLIAGQK AVVTYSRVAI STFKLRENQP IGCKVTLRKT KMYEFIDRLV NVALPRVRDF RGLNPKSFDG RGNYSLGIKE HIIFPEIDFD KVGESWGMDV TVCTTAQTDD EARALLTAFN FPFRQ
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