| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1351 |
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| Symbol | |
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| ID | 3675768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1484698 |
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| End bp | 1488897 |
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| Gene Length | 4200 bp |
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| Protein Length | 1399 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637712902 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_317964 |
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| Protein GI | 75675543 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.221368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAG AAGTAATGAA TTTATTCAAT CCGACGACTC CGGCCCAGGT CTTCGACCAG
ATCCGGATTT CGATCGCGTC GCCGGAGAAA ATTTTGTCGT GGTCCTACGG CGAGATCAAG
AAGCCGGAAA CGATCAACTA CCGCACGTTC AAGCCGGAGC GTGACGGCCT GTTCTGCGCG
CGCATCTTCG GGCCGATCAA GGATTACGAG TGCCTGTGCG GCAAGTACAA GCGGATGAAG
TACAAGGGGA TCATCTGCGA GAAGTGCTCG GTCGAGGTGA CGCTGTCTCG CGTGCGCCGC
GAGCGCATGG GTCATATCGA GCTGGCCGCG CCCGTCGCCC ACATATGGTT CCTGAAGTCG
CTGCCTTCCC GCATCGGCCT TCTGCTCGAC ATGACGCTGA AGGATCTCGA GCGCATTCTC
TATTTCGAAT ACTACGTCGT TCTGGAGCCT GGCCTCACCG CGCTCAAGGA CCGTCAGCTG
CTGTCGGAAG AGGAGTACCT TCGCGCGCAG GACGAGTACG GCCAGGACAG CTTCACCGCC
ATGATCGGCG CCGAAGCGAT CCGGGAACTG CTGAAAGGGC TCGAACTCGA AAGGCTGGAG
GCCGAACTCC GCGCGGAGAT GCAGGCGACC GAGTCCGACA TCAAGCACAA GAAGCTCGCC
AAGCGCCTGA AGATCGTCGA AGCCTTCCGC TTTTCCGGTA ACAAGCCGGA GTGGATGATT
CTCACCGTGG TGCCGGTCAT CCCGCCGGAT CTGCGCCCAC TGGTGCCGCT CGATGGCGGC
CGCTTCGCCA CGTCCGACCT CAATGACCTG TACCGCCGCG TCATCAACCG CAACAACCGC
CTGAAGCGGC TGATGGAGCT GCGCGCGCCC GACATCATCA TCCGCAACGA AAAGCGAATG
CTTCAGGAAG CGGTCGATGC GCTGTTCGAC AACGGCCGGC GCGGCCGCGT CATCACCGGC
GCGAACAAGC GCCCGCTGAA GTCGCTCGCC GACATGCTGA AGGGCAAGCA GGGACGCTTC
CGCCAGAACC TGCTCGGCAA GCGCGTCGAT TATTCCGGCC GCTCCGTCAT CGTCGTCGGT
CCCGAACTGA AGCTGCACCA GTGCGGCCTG CCGAAGAAGA TGGCGCTGGA GCTGTTCAAG
CCGTTCATCT ATTCGCGGCT TGATGCCAAG GGGCTGTCCA CGACGGTGAA GCAGGCCAAA
AAACTCGTCG AAAAGGAGCG TCCCGAGGTC TGGGACATTC TCGATGAGGT CATTCGCGAA
CATCCGGTGC TGCTGAACCG CGCGCCGACG CTGCATAGGC TCGGTATTCA GGCGTTCGAG
CCGACCCTGA TCGAGGGCAA GGCGATTCAG CTTCATCCGC TGGTTTGCGC CGCCTTTAAC
GCCGACTTCG ACGGCGACCA GATGGCCGTG CACGTTCCGC TTTCGCTTGA GGCGCAATTG
GAAGCGCGTG TGCTGATGAT GTCGACCAAC AACATCCTGC ACCCTGCGAA CGGTCAGCCG
ATCATCGTCC CCAGCCAGGA CATCGTGCTC GGTCTTTATT ATCTTTCGAT CATGCGTGAG
GGCTTGCCCG GCGAGGGCAA GGTGTTCGGC GATATGGCCG AGCTGGAACA CGCGCTGCAT
TCGGGTGTCA TCCATCTTCA CACCAGCATC AAGTATCGCT GGGATCAGAC CGACGAGAAT
GGTGAGCCGA TCAAGCGTCT GATCGACACG ACCGCAGGCC GCGTCATGCT CGGCCAGGTG
CTGCCGAAGT CGCAGAAGAT ATCGTTTGAC GCCATCAACA AGCTGATGAC CAAGCGTGAA
ATCTCCGGCG TGATCGACCA GGTCTATCGT CACTGCGGTC AGAAGGAGAC CGTGATCTTC
TGCGACCGGA TCATGGCGCT CGGCTTCTAC AACGCGTTCA AGGCCGGCAT CTCCTTCGGC
AAGGACGACA TGGTCGTCCC CCATGGGAAG TGGAAGATCG TCGACACCAC GCGCGCGCTG
GCGAAGGATT TCGAGCAGCA GTACAACGAC GGCCTGATCA CGCATGGCGA GAAATACAAC
AAGGTCGTTG ACGCATGGTC CAAGGCGACG GAAGAAATCG CCAAGGAGAT GATGAAGGAA
ATTTCTTCGA CCAAGAAGGA CGCCAAGGGC ATCGAGGCCC AGATCAACTC GATCTACATG
ATGGCGCATT CCGGCGCGCG AGGCTCGCCC GCCCAGATGC GTCAGCTCGC CGGTATGCGC
GGCCTGATGG CGAAGCCGTC GGGCGAGATC ATCGAGACGC CGATCATCTC CAACTTCAAG
GAGGGGCTGT CGGTTCTTGA ATACTTCAAC TCGACCCATG GCGCCCGCAA GGGTCTCGCG
GACACCGCGT TGAAGACGGC GAACTCGGGC TATCTGACCC GCCGCCTGGT CGACGTCGCG
CAGGATTGCA TCATCACCCA GGATGACTGC GGCACGAAGC TCGGCATCAA GATGCGCGCC
ATCGTCGATG CCGGCACGGT GGTGGCGTCG CTGGGATCGC GCATCCTGGG CCGCACGGCC
TGCGAAGACA TCCGTAATCC CGCGAGCAAC GAGGTGCTGA TTGAGCGCAA TACCTTGATG
GAAGAAAGCC ATGTCGATCA GATCTCGAAG GCTGGCATCC AGGAGGTCAA GATCCGCTCG
GCTTTGACCT GCGAACTGAT CAACGGCATC TGCGGCAAGT GCTACGGCCG TGATCTGGCC
CGCGGCACGC CCGTAAATCA CGGAGAGGCG GTCGGCGTCA TCGCGGCGCA GTCGATCGGT
GAGCCCGGCA CGCAGCTCAC GATGCGCACG TTCCATATCG GCGGCGCCGC GCAGATCAAC
GAGCAGTCGG TGATCGAGTC GAACTTCGAC GGCAAGATCA CGATCAGGAA CAAGGCGATC
GCAAGAAACG GCGAAGGTCA TCTGGTTGCG ATGGTGCGCA ACATGGTGGT CGCCGTTGTC
GATGCGGACG GCACCGAACG CGCAACTCAC CGTATTCAGT ACGGCGCGCG CATGCACGTC
GACGAGGGCG ACATGGTCAA GCGCGGCCAG CGTATCGCCG AGTGGGATCC CTATACCCGG
CCGGTTCTGA CGGAGCTTGA AGGCACCATC GGATTCGAAG ATCTGATCGA AGGTCAGTCG
ATCTCCGAGA CGCTCGATGA ATCCACCGGT ATCGCCAAGC GCATCGTGAT CGACTGGCGT
GGTACGCGCG GCGGAGCGGA TCTGCGCCCG GCTATCGTGA TCAAGGGCAA GGACGGCAAG
GTGCTGAAGC TTCCCCGTGG CGGCGACGCC CGCTACATGC TGTCGGTCGA CGCTATTCTG
TCGGTCGATG TCGGCGCCAA GGTGAAGCCT GGCGATATCC TGGCGCGTAT CTCGACCGAG
AGCGCGAAGA CCCGCGACAT CACCGGTGGT CTACCGCGAG TGGCCGAACT GTTCGAGGCA
CGCCGGCCGA AGGACGCGGC AATTATCGCG GAAATCGCCG GCACCATCCG GTTCGGTCGC
GATTACAAGA ACAAGCGCCG CATCTCGATA GAGCCGGTTG ACCAGGAAGA GGAGACCCGC
GAGTACCTCA TTCCGAAGGG CAAGCATATC CATCTGCAGG ATGGCGATAT CGTCGAGAAG
GGTGACTTTA TCGTCGATGG CAATCCCGCG CCGCACGACA TCCTGGCGAT CAAGGGCATC
GAAGAACTCG CCGCCTATCT GGTCAACGAG ATCCAGGAAG TCTATCGCTT GCAGGGCGTG
CTCATCAACG ACAAGCACAT CGAGGTGATT GTTCGTCAAA TGCTTCAGAA GGTCGAGATT
ATCGATCAGG GCGAGACCGA CATGATCTCG GGCGAGCAGA TCGACAAGAT CGAGTTCGAC
CGGCTCAACC TCAAGGCTCA GGAAGAAGGC AAGAAGATCG CCACGGGAAC GCCGGTTCTT
CTCGGCATCA CCAAGGCCAG CCTGCAGACC CGCTCGTTCT TCTCGGCGGC GTCGTTCCAG
GAGACCACGC GTGTGCTCAC CGAGGCCGCG GTCAACGGCA AGGTGGACCC GTTGGAGGGC
CTGAAGGAAA ACGTCATCGT CGGTCGACTC ATTCCAGCGG GCACCGGCGC GTCGATGGCC
AAGATCCGTG AAGTCGCGGT CAAGCGCGAC AGGTTGATTC TCGACGAGCG CGAGAAACAG
GCGGCGATCG TGCCGTCCGC TCCCGAAGCC GAACCGTTGG CGCTTCCGCC GGCGGAGTAG
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| Protein sequence | MNQEVMNLFN PTTPAQVFDQ IRISIASPEK ILSWSYGEIK KPETINYRTF KPERDGLFCA
RIFGPIKDYE CLCGKYKRMK YKGIICEKCS VEVTLSRVRR ERMGHIELAA PVAHIWFLKS
LPSRIGLLLD MTLKDLERIL YFEYYVVLEP GLTALKDRQL LSEEEYLRAQ DEYGQDSFTA
MIGAEAIREL LKGLELERLE AELRAEMQAT ESDIKHKKLA KRLKIVEAFR FSGNKPEWMI
LTVVPVIPPD LRPLVPLDGG RFATSDLNDL YRRVINRNNR LKRLMELRAP DIIIRNEKRM
LQEAVDALFD NGRRGRVITG ANKRPLKSLA DMLKGKQGRF RQNLLGKRVD YSGRSVIVVG
PELKLHQCGL PKKMALELFK PFIYSRLDAK GLSTTVKQAK KLVEKERPEV WDILDEVIRE
HPVLLNRAPT LHRLGIQAFE PTLIEGKAIQ LHPLVCAAFN ADFDGDQMAV HVPLSLEAQL
EARVLMMSTN NILHPANGQP IIVPSQDIVL GLYYLSIMRE GLPGEGKVFG DMAELEHALH
SGVIHLHTSI KYRWDQTDEN GEPIKRLIDT TAGRVMLGQV LPKSQKISFD AINKLMTKRE
ISGVIDQVYR HCGQKETVIF CDRIMALGFY NAFKAGISFG KDDMVVPHGK WKIVDTTRAL
AKDFEQQYND GLITHGEKYN KVVDAWSKAT EEIAKEMMKE ISSTKKDAKG IEAQINSIYM
MAHSGARGSP AQMRQLAGMR GLMAKPSGEI IETPIISNFK EGLSVLEYFN STHGARKGLA
DTALKTANSG YLTRRLVDVA QDCIITQDDC GTKLGIKMRA IVDAGTVVAS LGSRILGRTA
CEDIRNPASN EVLIERNTLM EESHVDQISK AGIQEVKIRS ALTCELINGI CGKCYGRDLA
RGTPVNHGEA VGVIAAQSIG EPGTQLTMRT FHIGGAAQIN EQSVIESNFD GKITIRNKAI
ARNGEGHLVA MVRNMVVAVV DADGTERATH RIQYGARMHV DEGDMVKRGQ RIAEWDPYTR
PVLTELEGTI GFEDLIEGQS ISETLDESTG IAKRIVIDWR GTRGGADLRP AIVIKGKDGK
VLKLPRGGDA RYMLSVDAIL SVDVGAKVKP GDILARISTE SAKTRDITGG LPRVAELFEA
RRPKDAAIIA EIAGTIRFGR DYKNKRRISI EPVDQEEETR EYLIPKGKHI HLQDGDIVEK
GDFIVDGNPA PHDILAIKGI EELAAYLVNE IQEVYRLQGV LINDKHIEVI VRQMLQKVEI
IDQGETDMIS GEQIDKIEFD RLNLKAQEEG KKIATGTPVL LGITKASLQT RSFFSAASFQ
ETTRVLTEAA VNGKVDPLEG LKENVIVGRL IPAGTGASMA KIREVAVKRD RLILDEREKQ
AAIVPSAPEA EPLALPPAE
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