| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1316 |
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| Symbol | rpsD |
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| ID | 3676582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 1447600 |
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| End bp | 1448217 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637712866 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_317929 |
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| Protein GI | 75675508 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTAAGC GCAACGAGGC GAAGTACAAA ATCGATCGCC GCATGGGGCA GAACATCTGG
GGCCGCCCTA AGAGCCCCGT CAACAAGCGC GAATACGGTC CCGGCCAGCA CGGCCAGCGC
CGCAAGGGCA AGCTCTCCGA TTTCGGCACC CAGCTTCGCG CCAAGCAGAA GCTCAAGGGC
TATTACGGCA ACATTTCCGA ACGGCAGTTC TACGCGATTT ACGTCGAAGC GACCCGCATG
AAGGGCGATT CGGGTGAGAA CCTGATCGGC CTGCTGGAGC GCCGTCTCGA CACCGTGGTT
TATCGCGCGA AGTTCGTGCC GACCATCTTC GCCGCTCGCC AGTTCATCAA CCACGGCCAT
GTCAAGGTGA ACGGTCGCCG CGTCAACATT CCGAGCTACA AGCTAAAGGT CGGCGATACC
GTCGAAGTGA AGGACGCATC GAAACAGCTC GCGCTCGTGC TGGAAGCCAA CCAGCTCGCC
GAACGCGATG TGCCCGATTT CATCGACGCC GACCACAACA AGCAAAGCGC GAAATTCATT
CGCATTCCGC AGCTTGCGGA CGTTCCTTTC GCGGTGCAGA TGGAGCCCCA TCTGATCGTC
GAATTCTATT CGCGCTGA
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| Protein sequence | MTKRNEAKYK IDRRMGQNIW GRPKSPVNKR EYGPGQHGQR RKGKLSDFGT QLRAKQKLKG
YYGNISERQF YAIYVEATRM KGDSGENLIG LLERRLDTVV YRAKFVPTIF AARQFINHGH
VKVNGRRVNI PSYKLKVGDT VEVKDASKQL ALVLEANQLA ERDVPDFIDA DHNKQSAKFI
RIPQLADVPF AVQMEPHLIV EFYSR
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