Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1287 |
Symbol | alaS |
ID | 3675083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 1420243 |
End bp | 1422918 |
Gene Length | 2676 bp |
Protein Length | 891 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637712837 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_317900 |
Protein GI | 75675479 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.178643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG TTAACGACAT CAGGTCGGCG TTTCTGAACT ATTTCGCGGC CAACGGCCAC CAGATCGTGC CTTCGTCACC GCTGGTTCCG CGCAACGATC CGACGCTGAT GTTCACCAAT GCGGGCATGG TGCAGTTCAA GAACGTCTTC ACGGGCGTCG AGAAGCGACC CTATCAGCGC GCCACCACTT CGCAGAAATG CGTGCGCGCC GGCGGCAAGC ACAATGATCT CGACAACGTC GGATACACCG CGCGGCATCA CACCTTCTTC GAGATGCTCG GCAACTTCTC GTTCGGCGAC TACTTCAAGG ACCGCGCGAT CGAACTGGCA TGGAAGCTGG TCACCCAGGA GTTCGGCCTG CCGAAGGACC GCCTTACAGC GACGGTCTAT ATCGACGACG ACGGGGCGTT CGACCTCTGG AAGAAGATCG CGGGCCTGCC TGAATCCCGC ATTATCCGCA TAGCTGGCTC GGACAATTTC TGGCAGATGG GTGACACCGG TCCGTGCGGC CCGTGCTCGG AGATATTTTA CGATCACGGC GACAGGATTC CCGGCGGGCC TCCGGGATCG CCGGAGCAGG ATGGCGATCG CTTCGTCGAA ATCTGGAATC TCGTGTTCAT GCAATACGAG AAGCTGCCGG ACGGCAGCCG CCCGAACCTG CCGAAGCCGT CGATCGACAC CGGCGCCGGG CTCGAGCGCG TGGCCGCCGT GCTTCAGGGC AAGCACGACA ACTACGACAT CGACCTGTTC GTGGCGCTGA TCCGCGCGGC GGCCGATCTG ACGGGCGCGG ACCCGCAAGG TCCGATGAAG GCGTCGCTGC GCGTGATCGC CGACCACTTG CGCGCATCCT CATTCCTGAT CGCCGACGGG GTGCTGCCGT CGAACGAAGG CCGGGGCTAT GTGCTGCGCC GGATCATGCG ACGCGCGATG CGCCATGCCC AACTGCTCGG CGCGAGGGAG CCGCTGATGT GGCGGCTGGT GGGCGTGCTG GTGCGCGAGA TGGGCGAGGC CTTTCCCGAA TTGCAGCGCG CGCGGCCTTT GATCGAGGAA ACGCTACGGT TGGAGGAGAC TCGCTTTCGC AAGACGCTGG AGCGCGGACT GTCCATTCTG GATGAGAAGA GCGCGTCGCT GAAGCAGGGC GACATGTTCG ACGGCGAGAC CGCGTTCACG CTGTACGACA CTTATGGCTT TCCGCTCGAT CTCACCCAGG ACGCGCTGCG CGCGCGCGGC ATCGGCGTGG ATCTGGCGTC GTTCACCGAT GCGATGGAAC AGCAGAAGGC CAAGGCGCGG GCGTCATGGT CGGGCTCCGG CGAGGCCGCG GCCGAGTCGA TCTGGTTTCC GTTGCGCGAG AAACTCGGTG CGACCGAGTT TCTCGGCTAT GAGACCGAGG CCGCCGAAGG CGTCGTCGCC GCGCTCGTGA AGGATGGCGA GGAAGCCGAC ACCCTCAAGG CCGGCGAGAG CGGGGCCATC GTTCTGAACC AGACACCGTT CTATGGGGAA TCCGGTGGGC AGGTCGGTGA CACCGGCTTT CTCATCGCCG ATGGCGTGCG CTTTCGTGTC ACCGACACAC AGAAGAAAGC GGGCGATCTG TTCGTGCATC TCGGCACCGT CGAGCAGGGC GTTCTCGCAC CCGGCATGGC GCTGGCGCTG GAGGTCGATC ACGATCGCCG CTCTGCGATC CGCGCCAACC ATTCGGCGAC CCATCTGTTG CACGAGGCGC TGCGGCAGGT GCTCGGTGAT CACATCGCGC AGCGCGGCTC GCTGGTCGCG CCCGAGCGGC TGCGTTTCGA CTTCGCTCAC AACAAGCCGA TCAGCGCGGA CGAACTGCGC TGCATCGAGG ACATCGCTAA CGATGTCGTG CTGGAGAACG GCGAGGTGAC GACACGGCTG ATGGCGGTGG ACGACGCGCG CGAGGCGGGC GCGCGGGCGT TGTTCGGCGA AAAATACGGC GACGAGGTGC GGGTGGTGTC CATGGGCGGC ACGGACCGGC ACGGCGCGGC GAGCAATGCG CTCGGCTGGT CGGTCGAACT CTGCGGCGGC ACCCATGTGA AGCGCACCGG CGATATCGGC CTGATCTCGG TGGTCGGCGA AAGCGCGGTG GCGTCAGGCG TACGCCGGAT CGAGGCGCTA ACCGGGCATC AGGCTCGCCA TCACGCCAAC CACGCTATCC AGCTCGCGAA GACCGCGGCC GGTGAATTAC GCACCTCGCT CGACGACATG CCGGCGCGGA TCGCATCGCT GATGGAGGAG CGCAAGAAGC TCGAACGCGA ACTGTCCGAG GCGCGCAAGA AGCTCGCCAT GGGAGGGGCC GCGAGCGCAT CCTCCGGCGC GACGACGGGT GTGCGCGATG TCGGCGGCAT CAAGCTGATG GCGCGTTCGG TCGAAGGCAT CGAGATCAAG GATCTCAAGA GCCTCGCGGA TCAAGGCAAG AAGCAGCTCG GCTCGGGCGT CGTCGCGCTG GTCGCGACCA GCGGCGACGG CAAGGCCAGC GTCGTCGTCG GCGTGACGCC TGATCTGGTG ACCCGCTTCT CGGCGGTCGA TCTCGTCCGC AAGGCGTCCG AGGTGCTTGG CGGCAAGGGC GGCGGTGGCA AGCCGGATAT GGCGCAGGCC GGCGGTCCCG ATGGCGCCAA GGCGGGCGCG GCGCTCGACG CCATCGCCGC GGCGATGGGC GCGTAG
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Protein sequence | MSGVNDIRSA FLNYFAANGH QIVPSSPLVP RNDPTLMFTN AGMVQFKNVF TGVEKRPYQR ATTSQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKDRAIELA WKLVTQEFGL PKDRLTATVY IDDDGAFDLW KKIAGLPESR IIRIAGSDNF WQMGDTGPCG PCSEIFYDHG DRIPGGPPGS PEQDGDRFVE IWNLVFMQYE KLPDGSRPNL PKPSIDTGAG LERVAAVLQG KHDNYDIDLF VALIRAAADL TGADPQGPMK ASLRVIADHL RASSFLIADG VLPSNEGRGY VLRRIMRRAM RHAQLLGARE PLMWRLVGVL VREMGEAFPE LQRARPLIEE TLRLEETRFR KTLERGLSIL DEKSASLKQG DMFDGETAFT LYDTYGFPLD LTQDALRARG IGVDLASFTD AMEQQKAKAR ASWSGSGEAA AESIWFPLRE KLGATEFLGY ETEAAEGVVA ALVKDGEEAD TLKAGESGAI VLNQTPFYGE SGGQVGDTGF LIADGVRFRV TDTQKKAGDL FVHLGTVEQG VLAPGMALAL EVDHDRRSAI RANHSATHLL HEALRQVLGD HIAQRGSLVA PERLRFDFAH NKPISADELR CIEDIANDVV LENGEVTTRL MAVDDAREAG ARALFGEKYG DEVRVVSMGG TDRHGAASNA LGWSVELCGG THVKRTGDIG LISVVGESAV ASGVRRIEAL TGHQARHHAN HAIQLAKTAA GELRTSLDDM PARIASLMEE RKKLERELSE ARKKLAMGGA ASASSGATTG VRDVGGIKLM ARSVEGIEIK DLKSLADQGK KQLGSGVVAL VATSGDGKAS VVVGVTPDLV TRFSAVDLVR KASEVLGGKG GGGKPDMAQA GGPDGAKAGA ALDAIAAAMG A
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