| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1287 |
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| Symbol | alaS |
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| ID | 3675083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1420243 |
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| End bp | 1422918 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637712837 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_317900 |
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| Protein GI | 75675479 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.178643 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG TTAACGACAT CAGGTCGGCG TTTCTGAACT ATTTCGCGGC CAACGGCCAC
CAGATCGTGC CTTCGTCACC GCTGGTTCCG CGCAACGATC CGACGCTGAT GTTCACCAAT
GCGGGCATGG TGCAGTTCAA GAACGTCTTC ACGGGCGTCG AGAAGCGACC CTATCAGCGC
GCCACCACTT CGCAGAAATG CGTGCGCGCC GGCGGCAAGC ACAATGATCT CGACAACGTC
GGATACACCG CGCGGCATCA CACCTTCTTC GAGATGCTCG GCAACTTCTC GTTCGGCGAC
TACTTCAAGG ACCGCGCGAT CGAACTGGCA TGGAAGCTGG TCACCCAGGA GTTCGGCCTG
CCGAAGGACC GCCTTACAGC GACGGTCTAT ATCGACGACG ACGGGGCGTT CGACCTCTGG
AAGAAGATCG CGGGCCTGCC TGAATCCCGC ATTATCCGCA TAGCTGGCTC GGACAATTTC
TGGCAGATGG GTGACACCGG TCCGTGCGGC CCGTGCTCGG AGATATTTTA CGATCACGGC
GACAGGATTC CCGGCGGGCC TCCGGGATCG CCGGAGCAGG ATGGCGATCG CTTCGTCGAA
ATCTGGAATC TCGTGTTCAT GCAATACGAG AAGCTGCCGG ACGGCAGCCG CCCGAACCTG
CCGAAGCCGT CGATCGACAC CGGCGCCGGG CTCGAGCGCG TGGCCGCCGT GCTTCAGGGC
AAGCACGACA ACTACGACAT CGACCTGTTC GTGGCGCTGA TCCGCGCGGC GGCCGATCTG
ACGGGCGCGG ACCCGCAAGG TCCGATGAAG GCGTCGCTGC GCGTGATCGC CGACCACTTG
CGCGCATCCT CATTCCTGAT CGCCGACGGG GTGCTGCCGT CGAACGAAGG CCGGGGCTAT
GTGCTGCGCC GGATCATGCG ACGCGCGATG CGCCATGCCC AACTGCTCGG CGCGAGGGAG
CCGCTGATGT GGCGGCTGGT GGGCGTGCTG GTGCGCGAGA TGGGCGAGGC CTTTCCCGAA
TTGCAGCGCG CGCGGCCTTT GATCGAGGAA ACGCTACGGT TGGAGGAGAC TCGCTTTCGC
AAGACGCTGG AGCGCGGACT GTCCATTCTG GATGAGAAGA GCGCGTCGCT GAAGCAGGGC
GACATGTTCG ACGGCGAGAC CGCGTTCACG CTGTACGACA CTTATGGCTT TCCGCTCGAT
CTCACCCAGG ACGCGCTGCG CGCGCGCGGC ATCGGCGTGG ATCTGGCGTC GTTCACCGAT
GCGATGGAAC AGCAGAAGGC CAAGGCGCGG GCGTCATGGT CGGGCTCCGG CGAGGCCGCG
GCCGAGTCGA TCTGGTTTCC GTTGCGCGAG AAACTCGGTG CGACCGAGTT TCTCGGCTAT
GAGACCGAGG CCGCCGAAGG CGTCGTCGCC GCGCTCGTGA AGGATGGCGA GGAAGCCGAC
ACCCTCAAGG CCGGCGAGAG CGGGGCCATC GTTCTGAACC AGACACCGTT CTATGGGGAA
TCCGGTGGGC AGGTCGGTGA CACCGGCTTT CTCATCGCCG ATGGCGTGCG CTTTCGTGTC
ACCGACACAC AGAAGAAAGC GGGCGATCTG TTCGTGCATC TCGGCACCGT CGAGCAGGGC
GTTCTCGCAC CCGGCATGGC GCTGGCGCTG GAGGTCGATC ACGATCGCCG CTCTGCGATC
CGCGCCAACC ATTCGGCGAC CCATCTGTTG CACGAGGCGC TGCGGCAGGT GCTCGGTGAT
CACATCGCGC AGCGCGGCTC GCTGGTCGCG CCCGAGCGGC TGCGTTTCGA CTTCGCTCAC
AACAAGCCGA TCAGCGCGGA CGAACTGCGC TGCATCGAGG ACATCGCTAA CGATGTCGTG
CTGGAGAACG GCGAGGTGAC GACACGGCTG ATGGCGGTGG ACGACGCGCG CGAGGCGGGC
GCGCGGGCGT TGTTCGGCGA AAAATACGGC GACGAGGTGC GGGTGGTGTC CATGGGCGGC
ACGGACCGGC ACGGCGCGGC GAGCAATGCG CTCGGCTGGT CGGTCGAACT CTGCGGCGGC
ACCCATGTGA AGCGCACCGG CGATATCGGC CTGATCTCGG TGGTCGGCGA AAGCGCGGTG
GCGTCAGGCG TACGCCGGAT CGAGGCGCTA ACCGGGCATC AGGCTCGCCA TCACGCCAAC
CACGCTATCC AGCTCGCGAA GACCGCGGCC GGTGAATTAC GCACCTCGCT CGACGACATG
CCGGCGCGGA TCGCATCGCT GATGGAGGAG CGCAAGAAGC TCGAACGCGA ACTGTCCGAG
GCGCGCAAGA AGCTCGCCAT GGGAGGGGCC GCGAGCGCAT CCTCCGGCGC GACGACGGGT
GTGCGCGATG TCGGCGGCAT CAAGCTGATG GCGCGTTCGG TCGAAGGCAT CGAGATCAAG
GATCTCAAGA GCCTCGCGGA TCAAGGCAAG AAGCAGCTCG GCTCGGGCGT CGTCGCGCTG
GTCGCGACCA GCGGCGACGG CAAGGCCAGC GTCGTCGTCG GCGTGACGCC TGATCTGGTG
ACCCGCTTCT CGGCGGTCGA TCTCGTCCGC AAGGCGTCCG AGGTGCTTGG CGGCAAGGGC
GGCGGTGGCA AGCCGGATAT GGCGCAGGCC GGCGGTCCCG ATGGCGCCAA GGCGGGCGCG
GCGCTCGACG CCATCGCCGC GGCGATGGGC GCGTAG
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| Protein sequence | MSGVNDIRSA FLNYFAANGH QIVPSSPLVP RNDPTLMFTN AGMVQFKNVF TGVEKRPYQR
ATTSQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKDRAIELA WKLVTQEFGL
PKDRLTATVY IDDDGAFDLW KKIAGLPESR IIRIAGSDNF WQMGDTGPCG PCSEIFYDHG
DRIPGGPPGS PEQDGDRFVE IWNLVFMQYE KLPDGSRPNL PKPSIDTGAG LERVAAVLQG
KHDNYDIDLF VALIRAAADL TGADPQGPMK ASLRVIADHL RASSFLIADG VLPSNEGRGY
VLRRIMRRAM RHAQLLGARE PLMWRLVGVL VREMGEAFPE LQRARPLIEE TLRLEETRFR
KTLERGLSIL DEKSASLKQG DMFDGETAFT LYDTYGFPLD LTQDALRARG IGVDLASFTD
AMEQQKAKAR ASWSGSGEAA AESIWFPLRE KLGATEFLGY ETEAAEGVVA ALVKDGEEAD
TLKAGESGAI VLNQTPFYGE SGGQVGDTGF LIADGVRFRV TDTQKKAGDL FVHLGTVEQG
VLAPGMALAL EVDHDRRSAI RANHSATHLL HEALRQVLGD HIAQRGSLVA PERLRFDFAH
NKPISADELR CIEDIANDVV LENGEVTTRL MAVDDAREAG ARALFGEKYG DEVRVVSMGG
TDRHGAASNA LGWSVELCGG THVKRTGDIG LISVVGESAV ASGVRRIEAL TGHQARHHAN
HAIQLAKTAA GELRTSLDDM PARIASLMEE RKKLERELSE ARKKLAMGGA ASASSGATTG
VRDVGGIKLM ARSVEGIEIK DLKSLADQGK KQLGSGVVAL VATSGDGKAS VVVGVTPDLV
TRFSAVDLVR KASEVLGGKG GGGKPDMAQA GGPDGAKAGA ALDAIAAAMG A
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