Gene Nwi_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1278 
Symbol 
ID3675074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1410836 
End bp1411714 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content55% 
IMG OID637712828 
ProductISSpo3, transposase 
Protein accessionYP_317891 
Protein GI75675470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.38837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.274857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAA AGCCGTCGAA AATTCGCGAA TTTCAGAAGC GGTTCCCTGA TGAAGAGGCT 
TGCCTGACGC ATTTGATGCG CACCCGGTTT GGCGAACGTC TGACCTGCTT CAAGTGTCAG
AAGCAGGCGA CCTATTACCG GGTCAAAAAC CGCCGCTCCT TTGAGTGCGA GCATTGCGGC
TATCAGGTGT ATCCGACTGC CGGAACGCCG TTCGAAAAGA CACGCACCAG CCTGCGGGAT
TGGTTCTATG TCATGTTTCT GTTCTGCGAG ACGCGGAACG GCGTGGCCGC GAAAGAAGTG
CAGCGTCAGC TAGGCGTGAC CTACAAGACC GCTTGGCGCA TGTGCCATCT TATCCGGCTC
TATATGGGCT ACGTCGATGG CGACTATCCA ATGGGCGGGC CCGGTAAGAC CGTTGAGGCG
GACGAAACGT TCATCGGCGG CAAGGACAAG GCTGGCAAAG ACGACAAAGC AATTGTCATG
GGGATGATCG AGCGTGGTGG CGATGTCGTT ACGCGCGTCG TCCATGCTCG TACAAAGGCG
CATATCTTGC CGCACATCGT TCGGTTTGTG AAAGAAGGTT CGCGCGTCCA CACGGACGAG
GCGTCAAACT TCAAGCTTCT CAAGGAGAAG TATGGCTACG ATCACGAAGC GGTTGATCAC
TCTGCGAAGG AGTACGTTCG CGGTGACGTA CACACTAACT CAATCGAGTC GTTCTGGTCT
CAGGTGAAGC GTGGGATCAA CGGGACCTAT GTTTGGGTTT CGAAAAAGCA CTTGCAGCTT
TACCTTCGCG AGTTCGAGTA TCGCCATAAC TTGCGGAAGC AACCCGGCCT GATGTTCGAG
CTTCTTTTGC AGGCGTTCCC GAAGGTACGG GTTGAGTGA
 
Protein sequence
MAQKPSKIRE FQKRFPDEEA CLTHLMRTRF GERLTCFKCQ KQATYYRVKN RRSFECEHCG 
YQVYPTAGTP FEKTRTSLRD WFYVMFLFCE TRNGVAAKEV QRQLGVTYKT AWRMCHLIRL
YMGYVDGDYP MGGPGKTVEA DETFIGGKDK AGKDDKAIVM GMIERGGDVV TRVVHARTKA
HILPHIVRFV KEGSRVHTDE ASNFKLLKEK YGYDHEAVDH SAKEYVRGDV HTNSIESFWS
QVKRGINGTY VWVSKKHLQL YLREFEYRHN LRKQPGLMFE LLLQAFPKVR VE