Gene Nwi_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1271 
Symbol 
ID3675694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1402348 
End bp1403031 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content60% 
IMG OID637712821 
Productpeptidase M50 
Protein accessionYP_317884 
Protein GI75675463 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.194788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0570245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGGCA TTTCACTTTA CACGCTGTCG GTCTGGGTGC TGCCGCTGGT GATCGCGATC 
ACCTTTCACG AAGCGGCGCA TGGATTCGTC GCCTACCGGC TCGGCGACAA TACCGCCTGG
AATCTCGGCC GCGTCAGCTT CAACCCGCTC AGGCACATCG ATGCCTTCGG CACGGTGATA
TTGCCGGGCA TTTTGCTGCT GTCGCACGCC CCGTTCCTGT TCGGCTACGC AAAGCCGGTT
CCGGTGAACT TCCGAAACCT GAACCATCCC CGCATCGACA TGGTCTGGGT GGCGCTTGCC
GGTCCCGCCA CCAACATTCT GCTGGCCCTC CTCGCGGCGT CGGCATTTCA CGGGCTTGGC
TTTATTCCCG GCAACAGCGC GCAATGGGTG GCCGACAACC TGAAGAACGC GTTGATCATC
AACGTCATCC TTGCGGTGTT CAACATGCTG CCGATCCCGC CGCTGGACGG CGGACGGGTT
GCCGTCGGCC TGTTGCCGAG CGTGCTGGCG GCCCCGCTTT CCCGTCTGGA ACCGTATGGG
CTGCTGATCC TGATCGGGGG TCTCCTGCTG CTTCCGATGC TTGGCCGCCA GCTCGATCTC
AACCTTGACG TGATCTCCAC CATCGTGAAA ACAGTTACCG GTTATGTGAT ACAGTTTCTT
TTGCTGGTCA CCGGCAATAT ATAA
 
Protein sequence
MPGISLYTLS VWVLPLVIAI TFHEAAHGFV AYRLGDNTAW NLGRVSFNPL RHIDAFGTVI 
LPGILLLSHA PFLFGYAKPV PVNFRNLNHP RIDMVWVALA GPATNILLAL LAASAFHGLG
FIPGNSAQWV ADNLKNALII NVILAVFNML PIPPLDGGRV AVGLLPSVLA APLSRLEPYG
LLILIGGLLL LPMLGRQLDL NLDVISTIVK TVTGYVIQFL LLVTGNI