| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1266 |
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| Symbol | |
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| ID | 3675689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 1397888 |
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| End bp | 1399123 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637712816 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_317879 |
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| Protein GI | 75675458 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.279661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.224738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTGTT TACAGAGGAT ATGCGCGCAT ATACCACGGC CCCGCGCCCT TTTTCGAAGT
TTTGAAGTCT TTGTCCAGGC ACGAGCCCTC ATGCCCCGAT CGCGAGTCCC CGGTTGGACA
CTCCTTGGCG CGGCGATCGC CGTCGTGGCC AGCTACGCGC TGTGGCACGG CGGGGGAAAG
CACAACGGGC CGTCCCGCGA CGCAGCACAG GCTCCGCCGG TTCCGGTCAA GATCGCCACC
GTACGCAAAG GTGACTTTCC GATCTACCTG ACCGGACTTG GAACCGTGCA GGGATTCAAT
ACCGTCGTGG TCCGCACGCG TGTCGATGGC CAGATCGAGC GGATCGCCTT CAAGGAGGGG
CAGTTGGTCG AGAAAGGCGA CCTGCTCGCC CATATCGATC GGCGACCGTA TCAGGCCGCG
CTCGACCAGG CCAAGGCCAA GAAAGCGCAG GATGAAGCCA ATCTGGCCAA CGCCGAACTC
GACCTGCAAC GCTATACCAA GCTCGGCGAA TTCGCGACGC GGAAGCAAAC CGACACCCAG
CGATCGATGG TGAAGCAGTT GACCGCGCAG ATCGCCGCGG ACGAGGCCGC GATTGTCAAT
GCACAGACCC AACTGGACTA TACCAGCATC CGCGCGCCGA TCGCGGGCGT CACCGGTTTT
CGTCTTGTCG ACCGCGGCAA CATCGTCAAT GCCTCAACCC AGACCGGCAT CGTCACCATC
GCGCAAATCG AGCCGATCGC CGTGATCTTC ACCGCGCCGG AAAACCAGCT GCCGCAAATC
AAGGACGCCA TCACGGCCGG TTCGCCGAAG ACGATCGCGT ATTCCCCCGA CGGCAAGCGG
ATGCTTTCCG AGGGAACGCT GATGCTGATC AACAATCAGG TCGACACCGC GAGCGGGACC
ATCCGCCTCA AGGCGGTTTT CGAGAACAAG GATCACGTCC TGTGGCCGGG CCAATCGGTT
TCGACCCGTC TGCTGGTATC AACCGCGAAG GATGCCGTCG TGGTTCCCGA TGACGCGATC
AAGCATGGAA CCGACGGTCT CTATGCCTAC GTCGTCAACA AGGACAACAA GGCTGAGTTT
CGCAGGATCA CGGTCGGCAA GTCGATCGAC GGCGAAACCA TCATCGAGAA AGGGATCGCT
CCGGGAGAAC GCGTCATTGT CGCCGGACAG TACCGTGTTC AACCGGGATC GGTCGTGACC
GAGACCATCG CGAGCTCCGG GTCATCGGAC GACTAG
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| Protein sequence | MVCLQRICAH IPRPRALFRS FEVFVQARAL MPRSRVPGWT LLGAAIAVVA SYALWHGGGK
HNGPSRDAAQ APPVPVKIAT VRKGDFPIYL TGLGTVQGFN TVVVRTRVDG QIERIAFKEG
QLVEKGDLLA HIDRRPYQAA LDQAKAKKAQ DEANLANAEL DLQRYTKLGE FATRKQTDTQ
RSMVKQLTAQ IAADEAAIVN AQTQLDYTSI RAPIAGVTGF RLVDRGNIVN ASTQTGIVTI
AQIEPIAVIF TAPENQLPQI KDAITAGSPK TIAYSPDGKR MLSEGTLMLI NNQVDTASGT
IRLKAVFENK DHVLWPGQSV STRLLVSTAK DAVVVPDDAI KHGTDGLYAY VVNKDNKAEF
RRITVGKSID GETIIEKGIA PGERVIVAGQ YRVQPGSVVT ETIASSGSSD D
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