Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1255 |
Symbol | |
ID | 3675678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 1384634 |
End bp | 1387069 |
Gene Length | 2436 bp |
Protein Length | 811 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637712805 |
Product | DEAD/DEAH box helicase |
Protein accession | YP_317868 |
Protein GI | 75675447 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.171092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGA GGAGCCTTAC CGAACGCGAT ATCTGCACGA AGTTCATCCT GCCCGCCGTC AAGCGCGCCG GCTGGGACGA GATGGCGCAG GTTCGGGAGG AGGTCTATTT CACCAAGGGC CGCATCATTG TGCGTGGCAA GCTGGTGACG CGCGGCAAGG CGAAGAAGGC CGACTTCGTT CTTTACTACA AGCCGAATAT CCCCATCGCG CTGATCGAGG CCAAGGACAA CAATCATTCG GTCGGCCACG GCATTCAGCA GGGCCTCGAT TACGCGATGA CGCTGGACAT CCCCTTCGTG TTTTCTTCGA ACGGCGACGG CTTCGTGTTC CATGACCGCA CCGGGCAAAG CGTTCCGGTC GAGACGAATC TCGGGCTCGA CGCCTTCCCG TCGCCGACCG ATCTATGGGC ACGCTATCGC GCCTGGAAGG GCCTCGACGC GGAAGCCGAG GAGATCGTGC TTCAGGATTA TTTCGACGAC GGCAGCGGCA AGACACCGCG CTATTATCAG GTGAACGCCG TCAACGCGGC GATCGAGGCC ATCGCCAAGG GCCGCGACCG CGTGCTGCTG GTGATGGCGA CCGGCACCGG CAAGACCTAT ACCGCGTTCC AGATCATCTG GCGCCTGTGG AAGGCCGGCC GCAAGAAGCG CATCCTGTTC CTTGCCGATC GCAACGTGTT GATCGACCAG ACGATGGTGA ACGACTTTCG CCCCTTCGGC GCGGCGATGG CAAAGCTGTC CACCAATGCC AGGACCATCG AGCGACAGGA CGGCACCGCC GTCGATCTGC CACTGGCGCT CGACACCAGG CGGCGCATCG ACACCGCTTT CGAGATCTAT CTCGGCCTCT ACCAGGCGAT TACCGGCCCG GAGGAACGGC AGAAGCTCTA CAAGGAATTT TCGCCCGGTT TCTTTGACCT GGTCGTGATC GACGAATGCC ATCGTGGCAG CGCGGCCGAG GATTCGGCAT GGCGGGAAAT CCTCGACCAC TTTTCCGGCG CGACGCAGAT CGGCCTCACC GCCACGCCGA AGGAAACCGA ATATGTCTCC AACACGGAAT ATTTCGGCGA ACCGGTTTTC ACCTATTCCC TGAAACAGGG CATCAGCGAC GGCTTTCTCG CGCCCTACAA GGTCATCAAG GTTCACATCG ACCGCGATGT GGAAGGCTAT CGCCCCGAAC TCGGCCAGCT CGATCGCGAC GGCAACGAGG TCGAGGACCG CATCTACAAC ACGAAGGATT TCGACCGCAA CATCGTGCTC GACGACCGCA CGGTGCTGAC CGCGAAGAAA ATCACCGAGT TCCTGAAGGA AAGCGGCGAC CGCTTCCAGA AGACCATCGT GTTCTGCGTC GATGAGGAAC ACGCGGCGCG CATGCGCCAG GCGCTCATCA ACGAGAACGC CGATCTGGTC GCGGAAAACC AGCGTTACGT CATGCGCATC ACCGGCAGCG ACAAGGAAGG CCAGGACCAG CTCGGCAACT TCATCGACCC CGAATCGAAA TATCCCGTGC TGGTGACCAC CTCGCGGCTG CTCTCGACCG GCGTCGATGC GCAGACCTGC CGGCTGATCG TGCTCGACCG CGCGGTCGGC TCCATGACCG AGTTCAAGCA AATCGTCGGG CGCGGCACCC GCGTTCACGA GGACACGAAG AAATTCTTCT TCACGCTGAT CGACTTTCGC GGCGCCACCA GCCATTTCGC CGACCCAGAT TTCGACGGCG ATCCGGCGCA GATTTATGAA CCCGGCAGCG GCGATCCGAT CACGCCGCCC GACGACGCGC CGCAGGGCGA CGACACGATC CCGCCGAAAC CCGGCGACGA CGAAACGGTG GTCGATCAGC CGGGCCTGCC GCTGCCAGCG GGTGGCCCGA TCCGCAAGAT TTATGTTGAT GGCGTCGGCG CCCGCATCCT GGCGGAGCGG GTGGAATATC TCGACGAGAA CGGCAAACTC GTCACCGAAT CCCTGCGCGA TTTCACCAGA ACGGCGCTGA AGAAGCGTTT CGCCAGCCTC GATGATTTCC TCAAGCGCTG GAAATCCGCC GAACGCAAGC ATGCCCTCAT CGAGGAACTG GAGGCCGAGG GCCTAGCGCT CGATGCCGTC GCCGGTGAAC TCGGCAAGAA CCTCGATCCC TTCGATCTGA TCTGCCACGT CGCCTTTGAT CGGAAGCCGC TCACCCGCCG TGAGCGGGCC GAAAACGTCA AGAAGCGTGA CGTGTTCACC AAATACGGGC CGCAGGCCCG CGCCGTGCTC GATGCGCTGC TGGAAAAGTA TCGCGACGAG GGCGTGCTCA ACCTCGACGA CGCCAACGTG CTGAAGGTAA CGCCCTTCAC CGCGATGGGC AGCGTCGTGC AACTCATCAA GGCGTTCGGC GGCAAGGAGG GCTTCGAGAA GGCCGTCCAC GAAATGCAGG ACGCGCTCTA CCAGGAGACC GCCTGA
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Protein sequence | MDKRSLTERD ICTKFILPAV KRAGWDEMAQ VREEVYFTKG RIIVRGKLVT RGKAKKADFV LYYKPNIPIA LIEAKDNNHS VGHGIQQGLD YAMTLDIPFV FSSNGDGFVF HDRTGQSVPV ETNLGLDAFP SPTDLWARYR AWKGLDAEAE EIVLQDYFDD GSGKTPRYYQ VNAVNAAIEA IAKGRDRVLL VMATGTGKTY TAFQIIWRLW KAGRKKRILF LADRNVLIDQ TMVNDFRPFG AAMAKLSTNA RTIERQDGTA VDLPLALDTR RRIDTAFEIY LGLYQAITGP EERQKLYKEF SPGFFDLVVI DECHRGSAAE DSAWREILDH FSGATQIGLT ATPKETEYVS NTEYFGEPVF TYSLKQGISD GFLAPYKVIK VHIDRDVEGY RPELGQLDRD GNEVEDRIYN TKDFDRNIVL DDRTVLTAKK ITEFLKESGD RFQKTIVFCV DEEHAARMRQ ALINENADLV AENQRYVMRI TGSDKEGQDQ LGNFIDPESK YPVLVTTSRL LSTGVDAQTC RLIVLDRAVG SMTEFKQIVG RGTRVHEDTK KFFFTLIDFR GATSHFADPD FDGDPAQIYE PGSGDPITPP DDAPQGDDTI PPKPGDDETV VDQPGLPLPA GGPIRKIYVD GVGARILAER VEYLDENGKL VTESLRDFTR TALKKRFASL DDFLKRWKSA ERKHALIEEL EAEGLALDAV AGELGKNLDP FDLICHVAFD RKPLTRRERA ENVKKRDVFT KYGPQARAVL DALLEKYRDE GVLNLDDANV LKVTPFTAMG SVVQLIKAFG GKEGFEKAVH EMQDALYQET A
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