| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1231 |
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| Symbol | |
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| ID | 3676112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1353788 |
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| End bp | 1355410 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637712781 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_317845 |
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| Protein GI | 75675424 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.995231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCG AACGCCTCTA TCTGTTCGAC ACCACGCTGC GTGACGGCGC GCAGACCAAC
GGCGTCGATT TCACCTTGCA GGACAAGCAG GCGATCGCGA AGATGCTGGA CGATCTCGGC
ATCGACTATG TCGAGGGCGG CTATCCCGGC GCCAACCCGA CCGATACCGG GTTCTTCTCG
CACAAGCCCG CGTTTCGCCA TGCGCGCTTC ACCGCCTTCG GCATGACGCG GCGTCCCGGA
CGATCGGCTT CCAATGATCC CGGACTGGCC GCGCTGATCG AGGCCGATGC GGATGCGATC
TGCTTTGTCG CGAAATCGTC CGCCTATCAG GTCAGGGTCG CGCTCGAAAC CACGAAAGAC
GAAAACCTGG CGTCGATCCG CGACAGCGTG AAGGCGGCCA CCGCAGTCGG CCGCGAGGTC
ATGGTGGACT GCGAGCATTT TTTCGACGGC TACAGGGAAG ACCCCGCATT CGCGCTGGCC
TGTGCAAAGG CGGCTTACGA CTCCGGCGCG CGGTGGGTGG TGTTGTGCGA CACTAACGGC
GGCGCCATGC CGAATGAGAT CGAGGCGACG GTTCGCGAGG CCGCGAAGCA CATTCCCGGC
GATCATCTGG GCATCCATGC CCATAACGAC ACCGAGCAGG CGGTCGCTAA TTCTTTAGCC
GCGGTGCGCG CGGGTGTACG GCAAATCCAG GGCACCCTGA ACGGTCTCGG CGAACGCTGC
GGCAATGCCA ATCTCTGCTC GCTGATCCCG ACGCTGAAAC TGAAGAAGGA ATTTTCCGAC
ATCTTCGAGA TCGGTGTGAC CGGGGATCGG CTTGCGGCTC TGACGCAGGT ATCGCGCACG
CTCGACAACA TGCTCAACCG TGCGCCGAAC CGGCACGCGC CCTATGTCGG CGAAAGCGCG
TTCGTCACCA AGACCGGCAT CCATGCCTCC GCGATCCTCA AGGATCCCGC GACCTACGAG
CATGTCGCGC CGGAATCGGT CGGCAACCGC CGCAAGGTGC TGGTGTCGGA TCAGGCCGGC
CGCTCAAATG TGCTTGCCGA ACTCGAACGC GCCAACATCG CGTTCGACAG GAACGATCCG
AAGCTCGGCC GGCTGGTGCG CGAGATGAAG GAGCGCGAGG CAGCGGGTTA CGCCTACGAA
TCCGCGAACG CGTCATTCGA TCTGCTGGCG CGGCGCACGC TCGGCCGCGT GCCCGAGTAT
TTCGACGTCG AGCAGTATGA CGTCAATGTC GAACAACGCT ACAATTCCCA CGGCCGGCGC
GTCACGGTCG CGATGGCGGT GGTGAAGGTC AGGGTCGACG GCCAGCCGCT GATTTCCGCC
GCCGAAGGCA ACGGTCCGGT CAATGCGCTC GATCTCGCCT TGCGCAAGGA TCTCGGCAAG
TACCAGAAAT ACATCGACGG GCTGAAGCTG ATCGACTACC GCGTGCGCAT CCTCAACGGA
GGCACCGGCG CGGTGACGCG GGTGCTGCTC GAGAGCGAGG ACGAGGAGGG CGAGCGCTGG
ACCACGATCG GCGTGTCGCC CAATATCATC GATGCGTCGT TCCAGGCCCT GATGGATTCG
GTATTCTACA AGCTGGTGAA GTCCGGCGCG CCGGCCGAAG GGGCGGTCCC GGAGCCGTCA
TGA
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| Protein sequence | MSRERLYLFD TTLRDGAQTN GVDFTLQDKQ AIAKMLDDLG IDYVEGGYPG ANPTDTGFFS
HKPAFRHARF TAFGMTRRPG RSASNDPGLA ALIEADADAI CFVAKSSAYQ VRVALETTKD
ENLASIRDSV KAATAVGREV MVDCEHFFDG YREDPAFALA CAKAAYDSGA RWVVLCDTNG
GAMPNEIEAT VREAAKHIPG DHLGIHAHND TEQAVANSLA AVRAGVRQIQ GTLNGLGERC
GNANLCSLIP TLKLKKEFSD IFEIGVTGDR LAALTQVSRT LDNMLNRAPN RHAPYVGESA
FVTKTGIHAS AILKDPATYE HVAPESVGNR RKVLVSDQAG RSNVLAELER ANIAFDRNDP
KLGRLVREMK EREAAGYAYE SANASFDLLA RRTLGRVPEY FDVEQYDVNV EQRYNSHGRR
VTVAMAVVKV RVDGQPLISA AEGNGPVNAL DLALRKDLGK YQKYIDGLKL IDYRVRILNG
GTGAVTRVLL ESEDEEGERW TTIGVSPNII DASFQALMDS VFYKLVKSGA PAEGAVPEPS
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