Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1218 |
Symbol | |
ID | 3675677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 1339417 |
End bp | 1339956 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637712768 |
Product | tripartite ATP-independent periplasmic transporter, DctQ component |
Protein accession | YP_317832 |
Protein GI | 75675411 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTGT TACTGGCCCT CAGCACAGCC ATCGACCGGC TCAACGAAAA GGTCGGGTAC GTATGCAACA TCCTTGTGCT GCTTGCCGTG CTGGTGAGCG CCGGCAATGC AATGATCCGA TATGCGTTCG GCTACAGTTC GAACAGCTGG CTCGAACTGC AATGGTACAT GTTCGCCATC CTCGTGATGT TCGGCGCATC CTACACCTTC AAACGCAATG AACACGTTCG GGTCGAGATT TTCTATCTGA TCCTGTCCGA TCGCGGCAGG CTCTGGCTGG ATCTCATCGG GACCCTCTTC TTTCTCATTC CTGCCTGCCT GTTGCTCAGC TACCTGTCCT GGCCTTTCTT CATGCAGTCT TATGCAATCG GCGAAGTATC CGGAAATGCC GGCGGTCTCG TTCGCTGGCC GATCAAGCTC GTCGTCCCGC TCGGATTCGT CATGCTCGCG ATTCAGGGGA TCTCGGAAGT GATCAAGCGG ATAGCGGCGC TACAGGGCCT TGTCACGATC CAGGCAACCT ACGAGAGACC GACTCAATGA
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Protein sequence | MRLLLALSTA IDRLNEKVGY VCNILVLLAV LVSAGNAMIR YAFGYSSNSW LELQWYMFAI LVMFGASYTF KRNEHVRVEI FYLILSDRGR LWLDLIGTLF FLIPACLLLS YLSWPFFMQS YAIGEVSGNA GGLVRWPIKL VVPLGFVMLA IQGISEVIKR IAALQGLVTI QATYERPTQ
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