Gene Nwi_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1198 
Symbol 
ID3674426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1304970 
End bp1306430 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content64% 
IMG OID637712748 
ProductSignal transduction histidine kinase 
Protein accessionYP_317812 
Protein GI75675391 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.407159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCGT TCGGCAAGCT GTTCCGCACT ACGGCGTTTC GGCTGACGTT GGTCTATTTG 
CTGTTGTTCG CGCTGTTTGC GGCTTCTCTT CTGGGATACT TTGCCTGGAA TACCCGCCGC
CTGATCACCG ACCAGATCGC GGCGACAGTG GGCGAGGAAA TCGGGCTGCT TACCGGCGTC
TTCAACCGCC GCGGCTTGCG CGGATTGGTC GGCGCCATCG AAAATCGCGC GCTGCGGCCC
GGCTCCAACC TTTATCTGGT GACGACGCCG GCGGGTCTTG GGGTTGCGGG TAATGTCGGG
TCGCTTCAGC CCGGTGTGAT GGAGACCGCC GGCTGGGCCG AAACCGCCTA TCGCAGGCTT
GACGAGCAGG ATCAGGCTCA TCACTACGCC CTGGTGCGGG TCACCGAACT GTCGAACGGC
TTCCGGTTGC TGATTGGCCG CGATCTGGAG GAGCGTCATC GCATTATCGG CGTGGTCGCT
TCGGCCGCGC AATGGTCACT GCTGATCGTC GTGGTCCTGG GGCTTGGCGG CGGCGTCTTT
GTGGCGCGGC GCGTGTTGCA CCGGATCGAC GCAATGACCG GTACCACGAA GCGCATCATG
GCTGGCGATC TAAGCGGTCG GCTTCCGGTC GGCCGCAGCG GCGACGAACT GGACCGGCTG
GCGGAAAATC TCAATGCTAT GCTCGAACGT ATCGAAGCGC TTATGAACGG TTTGAGGGAG
GTGTCGGACA ATATCGCCCA CGACCTCAAA ACGCCGTTGA CGCGTTTACG CAATCGCGCC
GAGGAAGCGC TCGCCAGGTC CGGCAATGAG AGCGATTATC GCGCGGCCCT GGAACAGACG
ATCGAGGAAT CCGATGGCCT TATCCGCACC TTCAATGCGC TCCTGATGAT CGCTCGCGCG
GAATCTGGAC ATGCACGCGA CAACATGGCC GATTTCGATG CCGCGGACGT CGCGGAGGGC
ATTCACGAAC TCTATGAGCC GCTGGCCGAA GACAACGGAA TGAAGCTCCA GGTTCAGACA
GGGTTCGCCC CGCTGCATGG CAATCGCGAA CTGATAAGCC AAGCGCTTGC GAACCTCGTC
GAAAACGCGA TCAAGTACGG GCAGCCGAAG CCTGCCTCGC CGCCGCTCGG TGCGGATGCC
GTCGCGGCCG ACGCCACGAT CCTGATCGAA GCCCGCCATG AGGGCGATCG GATCATTCTC
GCCGTGACCG ATCACGGTAG CGGGATTCCC GAAGCCGACC GCAAGCGCGC GGTCGAACGC
TTCGTGCGGC TCGAAACCAG CCGGACCCTG GCGGGATCCG GGCTTGGCCT CAGCCTTGCG
TCGGCTGTGG CCAGGCTGCA CGGCGGGGAG CTTGCGCTCG ATGATGCGCA GCCGGGTTTG
CGCGCCACGC TGTCGATCCC CGCGCGAAGC GCGTCAGGGC TTGCGGCCCC GACGGTGGAC
GTGCAACAGA ATGATGCATG A
 
Protein sequence
MTAFGKLFRT TAFRLTLVYL LLFALFAASL LGYFAWNTRR LITDQIAATV GEEIGLLTGV 
FNRRGLRGLV GAIENRALRP GSNLYLVTTP AGLGVAGNVG SLQPGVMETA GWAETAYRRL
DEQDQAHHYA LVRVTELSNG FRLLIGRDLE ERHRIIGVVA SAAQWSLLIV VVLGLGGGVF
VARRVLHRID AMTGTTKRIM AGDLSGRLPV GRSGDELDRL AENLNAMLER IEALMNGLRE
VSDNIAHDLK TPLTRLRNRA EEALARSGNE SDYRAALEQT IEESDGLIRT FNALLMIARA
ESGHARDNMA DFDAADVAEG IHELYEPLAE DNGMKLQVQT GFAPLHGNRE LISQALANLV
ENAIKYGQPK PASPPLGADA VAADATILIE ARHEGDRIIL AVTDHGSGIP EADRKRAVER
FVRLETSRTL AGSGLGLSLA SAVARLHGGE LALDDAQPGL RATLSIPARS ASGLAAPTVD
VQQNDA