Gene Nwi_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1192 
Symbol 
ID3674420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1298193 
End bp1298681 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content62% 
IMG OID637712742 
Productcytochrome c-type biogenesis protein CcmE 
Protein accessionYP_317806 
Protein GI75675385 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.164675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGCA AGCAGCGGCG CTTGACGATG ATCGGCGGAG CGCTCGTGGT GCTCGGCATC 
GCGGCCGCGC TGGTGCTTAA TGCCCTGCGC GATTCCATCG TGTTTTTCTC GACGCCGATG
ATGGTGTCGG AGAAGCATAT TCAGCCGGGG CAACGCTTTC GGCTAGGCGG GCTGGTGCAG
ACCGGTTCGC TGGTCCGCGG TGACAATCTC GCCGTTTCAT TCAGGGTGTC TGACGGGAGC
GCCACCCTCC CGGTGAGTTA CAAGGGCATT CTGCCTGATC TGTTCCGCGA GGGGCAGGGG
GTGGTCGCCG AGGGCGCGCT TGATAATTCG GGTGTGTTCC AGGCCGACAC CGTGCTGGCC
AAGCACGACG AGACCTACAT GCCGAAAGAG GTCGCGGATG CCTTGAAGAA GCAGGGGCAT
TGGAAGGACG ATTATGGCGC GCAGCCCGGA GCCGCTGAAG CTTCTAGCAA GCAGGAGGTG
TCGCAATGA
 
Protein sequence
MTRKQRRLTM IGGALVVLGI AAALVLNALR DSIVFFSTPM MVSEKHIQPG QRFRLGGLVQ 
TGSLVRGDNL AVSFRVSDGS ATLPVSYKGI LPDLFREGQG VVAEGALDNS GVFQADTVLA
KHDETYMPKE VADALKKQGH WKDDYGAQPG AAEASSKQEV SQ