Gene Nwi_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1188 
Symbol 
ID3676414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1293310 
End bp1294707 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content64% 
IMG OID637712738 
ProductSignal transduction histidine kinase 
Protein accessionYP_317802 
Protein GI75675381 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTA GGGAAATTCT AGGCTTTCGT TCCAATTCGC TGGCGTCGCG GCTGTTCCTG 
TCGGCGACCG CGTGGGTCGT GGTCGTGCTC CTCGTGACCG GCGTGGTGCT GTCTTCAGTC
TATCGCTCGG CGTCCGAGCG TGCCTTCGAC CGCCGCCTCA ATCTCTATCT CCGCACCCTG
ATCGCCGAAG TGACGGCGCC CGACGAGCCG GATGACCGTC AGTTCCAGTC GCTCGGTGAG
CCGCTGTTCG ATCTGCCCTT GTCGGGCTGG TACTGGGAGG TCGACCGTAC CGATCCGGGC
AAAGCGGAAA CCCGCGCATC GCGCTCGCTA TGGGACAAGA AGCTCCCGAA GCTCGTGGAT
CAGGGCATTG CGCTTTCCTC GTCCGGAGTC CGCGCCGGAT ATGTCGACGG GCCCGAAGGT
CAAATCCTCC GCATGGCGGA GCGGCCGGTC GATCTCGGCG CCGACGGCAA GTTCCGTGTC
GCCGTGGCCG GAGACGCCTC GGAAATTTTC GATGAAACGA GGGCTTTCGA CTATTACCTC
GGCGGCACCT TCGCCGCGCT CACGATCGGA TTGCTTCTCA CCACGATCTT TCAGGTGCGA
TTCGGTCTTG CGCCGCTGAA ACGGATCTCG GACGCGATCG CCGACATCCG GTCGGGCCGC
GCGGAGCGAC TGGAAGGTGA ATTCCCCGTG GAGATCGCGC CCCTTGCCTG GGAGACCAAC
GCGCTGATCG ATGCCAACCG GGAGATCGTC GAGCGTGCCC GCACCCACGT CGGCAACCTC
GCGCACGCGG TCAAGACGCC GCTTTCGGTT ATCATCAACG AGGCCAGCGC GCATGAGGGC
GATTCCTTCG CCGCCAAAAT GCTCGAACAG GCCGGGATGA TGCGCAACCA GGTCGCCCAT
CATCTGGAGC GCGCCCGCCT GGCTGCGCGG CTCACCGTCA TTGGAACGGT GACGGATGTC
GCGCCCGTCG TCGAGGCGCT GCGCAGGACC ATGGAGAAAA TTCATCGCGA TCGCGATATC
ACGATTGAGG TCGACGTCAG TCCGGGGACG AAATTTCGCG GCGAACGCCA GGATCTTGAG
GAGATGGTCG GCAATCTTGT AGACAATGCC TGCAAGTGGG CGCATTCGCG GGTGTTCATC
ACCACGTCCG TCCGTCCGCC TTCCGGAGTT GAGCCTGCGA TGCTGCACAT TACCGTCGAC
GATAACGGTC AGGGATTGTC GGATGCCGAG CGGATGCAGG CCTCGCAGCG CGGCCGCCGC
ATCGACGAGA CCAAGCCGGG ATCCGGACTG GGGTTGTCGA TCGTCACCGA TCTTGCAGCC
CTCTATGGCG GTCGCCTGAC GCTGGATACC GCGCCGATCG GCGGATTGCG CGCCGAACTG
TTGCTGCCGT CAGCTTGA
 
Protein sequence
MRVREILGFR SNSLASRLFL SATAWVVVVL LVTGVVLSSV YRSASERAFD RRLNLYLRTL 
IAEVTAPDEP DDRQFQSLGE PLFDLPLSGW YWEVDRTDPG KAETRASRSL WDKKLPKLVD
QGIALSSSGV RAGYVDGPEG QILRMAERPV DLGADGKFRV AVAGDASEIF DETRAFDYYL
GGTFAALTIG LLLTTIFQVR FGLAPLKRIS DAIADIRSGR AERLEGEFPV EIAPLAWETN
ALIDANREIV ERARTHVGNL AHAVKTPLSV IINEASAHEG DSFAAKMLEQ AGMMRNQVAH
HLERARLAAR LTVIGTVTDV APVVEALRRT MEKIHRDRDI TIEVDVSPGT KFRGERQDLE
EMVGNLVDNA CKWAHSRVFI TTSVRPPSGV EPAMLHITVD DNGQGLSDAE RMQASQRGRR
IDETKPGSGL GLSIVTDLAA LYGGRLTLDT APIGGLRAEL LLPSA