| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1177 |
|---|
| Symbol | |
|---|
| ID | 3675812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 1282396 |
|---|
| End bp | 1282980 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637712727 |
|---|
| Product | gene transfer agent (GTA) like protein |
|---|
| Protein accession | YP_317791 |
|---|
| Protein GI | 75675370 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5281] Phage-related minor tail protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACG ACCCGAGTCT GCATGAGACC TCGCGCACGC TTGACGATCT CACGGTGAGG
ACACAGGCGC TGACCACCAG CGCGGGCGGC TTCGCGCGAG CGATGACGCA GGCGTTTTCG
TCTTCGGTCA GCGGCGGCAA ACAGTTCGAC GACGTGCTGA AGACGCTGGC GCTGCGGGTC
TCGAGTCTTG CCGTGACGGC GGCGTTCAAG CCGCTGACGG CAAGCCTCAC CAGCGGCATC
TCCAGCCTGT TTTCCGGACT CGCCGGCAGC ATCGGCTCGT TCGGCGGCGT GCAGGCCCAT
GCTCTCGGCG GCATCAAGCC GTTCGCGGCC GGCGGCGTGA TCGGCGCGCC GAGCTATTTC
CCGATGATGG ACGGCGGCGT CGGCCTCGCC GGGGAGGCGG GACCGGAAGC GATCATGCCG
CTGTCGCGCG GGCCGGACGG CCGGCTCGGC GTGTCCGGCA AGGGCGGCGG CAACAGCATC
ACGGTGCAGA TCGCGACGCC GGACCTCGAC AGCTTCCGCC GCTCCGAGAG TTACATCGCG
GGCCAGATCG CGCGGGCGGT CGCGCGGGGA CAGCGGAGCC TGTGA
|
|---|
| Protein sequence | MTDDPSLHET SRTLDDLTVR TQALTTSAGG FARAMTQAFS SSVSGGKQFD DVLKTLALRV
SSLAVTAAFK PLTASLTSGI SSLFSGLAGS IGSFGGVQAH ALGGIKPFAA GGVIGAPSYF
PMMDGGVGLA GEAGPEAIMP LSRGPDGRLG VSGKGGGNSI TVQIATPDLD SFRRSESYIA
GQIARAVARG QRSL
|
|---|
| |