Gene Nwi_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1150 
Symbol 
ID3674746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1260594 
End bp1262873 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content64% 
IMG OID637712700 
Productpenicillin-binding protein 1A 
Protein accessionYP_317764 
Protein GI75675343 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAACA TCCTGCCCCC CGATTGGAAG AAGCGAATCC GGCATATCAT GCTGGATCTC 
GACGCGCGTA TCGATTCGAC CCTGTTCTCC TCGGCGGTCG GCGCGCGCGA GCTTTATGAG
CGCTTCTCAA CTTTCATGGA CCGCTTTTAT GTCGGCCATT GGAAACGCTG GATCTTCGTC
GAGCCCTTGT CGGAAGCCGC GACCCTGGGC CTCGGCGGTC TCATCCTCCT GCTGGCGCTG
GCGCAGCCAG CGTTTCGCGA AACCGCCGAC GAGGACTGGC TGAAGAAATC CGATCTCGCG
GTGACCTTCC TCGATCGCTA CGGCAATCCG ATCGGCAGCC GCGGCATCAA ACACAATGAT
TCGATTCCGC TGGAGGAGTT TCCGGACAAC CTGATCAAGG CGACTCTCGC GACCGAAGAC
CGCCGTTTCT ATAATCATTT CGGCATCGAC GTCGGCGGCA CCTTCCGCGC GGTGGTGACC
AACGCGCAAG CCGGCGGCGT GCGGCAGGGC GGCTCCTCGA TCACCCAGCA ACTCGCCAAG
AACCTTTTCC TCTCCAATGA GCGCACCATC GAGCGCAAGG TCAACGAAGC CTTCCTCGCC
GTCTGGCTGG AAACCCGACT GAGCAAGAAC GAGATCCTGA AACTGTATCT CGACCGGGCG
TACATGGGCG GCGGGACCTT CGGCGTCGAC GGCGCGGCGC ATTTCTATTT CAACAAGTCG
GTGCGCGACG TCAATCTCGC CGAATCCGCC ATGCTCGCCG GCCTTTTCAA GGCGCCGACC
AAATACGCCC CGCACATCAA CCTGCCTGCC GCTCGCGCCC GCGCCAACCA GGTGCTCGAC
AACATGGTCG ATTCAGGCTT CATGACCGAA GGTCAGGTGT TCGGCGCGCG GCGCAACCCC
GCCACCGCGG TCGACCGCCG CGACGAGAAC TCGCCGAATT ATTATCTCGA CTGGGCATTC
GAGGAAATGC GCAGGCTGGT CGAGACCTTT CCGCGCTCCT ATACCGAGCG CGTATTTGTC
GTGCGCACCA CGATCGACAT GAACGTGCAG CACGCGGCGG AAGAGGCGAT CGAGAGCCAG
TTGCGGCAGT TCGGCCGCGA CTATCACGCC ACGCAAGCGG CAACGGTGGT CGCGGATCTC
GACGGCGGCG TGCGCGCGAT GGTCGGCGGG CGTGATTACG GCGCGAGCCA GTTCAATCGC
GCGACGGACG CCCTGCGCCA GCCCGGATCC TCGTTCAAGC CGTATGTCTA CACCACGGCG
CTGCTCAACG GCTTCAAGCC GACATCCAAG ATCGTCGACG GTCCCGTCTG CCTCGGCAAC
TGGTGCCCGC AGAATTATGG TCATTCCTAC TCCGGCACGG TGACGCTGAC CCAGGCGCTG
ACGCGCTCAA TCAATGTCGT GCCGGTGAAG CTCTCAATCG CGCTCGGCAA GGGCGCGAAG
AATCCCGCCA AGGCCGGACG CGCCAAGATC ATCGAGGTCG CCCGCAAGTT CGGCATCGTC
ACGCCGCTGC CCGATACGCC GTCGCTGCCG ATCGGGGCCG ACGAGGTCAA TGTGCTCGAA
CATGCCGTCG CCTATGCGAC GTTCCCGAAC AAGGGCAAGG CGGTGACGCC CCACGCGGTT
CTCGAGGTCC GCACCGGCGC CGGCGATCTG GTGTGGCGCT ACGACCGCGA CGGTCCCGAA
CCGCGCCAAA TCATTCCGCC TTCAGTCGCC GCGGACATGG CGGGCATGAT GAGTCATGTG
GTGAGCGAAG GCACCGCGCG CCGCGCGATC CTTGACGGCA TTCCCGCCGC CGGCAAGACC
GGCACCACCA ACGCTTATCG CGACGCGTGG TTCGTCGGCT ACACCGGAAA CTTTGCATGC
GGTGTCTGGT ACGGCAATGA CGACTACTCA CCGACCAATC GCCTGACCGG CGGCGCGCTG
CCCGCCCAAA CCTGGCACGA CATCATGACG GCCGCGCATC GCGGTATCGA GATCAAGGAC
ATCCCCGGTG TTGCCACGCC GGCGAAACCG ACCGCAGCCA TGACCGCCAG AACCGCAGCC
AGCCAGGACA ATGCAACCCC GGCCCCCCCG CCTATCCTGA CCAGGCGCGG AGCCGATATC
CTGGTCCGCG TGGAAAAGAT GCTTGATGAA GCAGCCAGGA CAATCGGAAA AACCTCGGCT
GGAGAACCGG TCAATCCGGC TCGCTCCGAC GCCACCGATC CGACCTCGCC CCGCGGTGAG
GCCAAGAACG TGGCGACCGC GTCCGGCGAC CGGGCGATCC CGACGCCAAG CAAAAATTAG
 
Protein sequence
MRNILPPDWK KRIRHIMLDL DARIDSTLFS SAVGARELYE RFSTFMDRFY VGHWKRWIFV 
EPLSEAATLG LGGLILLLAL AQPAFRETAD EDWLKKSDLA VTFLDRYGNP IGSRGIKHND
SIPLEEFPDN LIKATLATED RRFYNHFGID VGGTFRAVVT NAQAGGVRQG GSSITQQLAK
NLFLSNERTI ERKVNEAFLA VWLETRLSKN EILKLYLDRA YMGGGTFGVD GAAHFYFNKS
VRDVNLAESA MLAGLFKAPT KYAPHINLPA ARARANQVLD NMVDSGFMTE GQVFGARRNP
ATAVDRRDEN SPNYYLDWAF EEMRRLVETF PRSYTERVFV VRTTIDMNVQ HAAEEAIESQ
LRQFGRDYHA TQAATVVADL DGGVRAMVGG RDYGASQFNR ATDALRQPGS SFKPYVYTTA
LLNGFKPTSK IVDGPVCLGN WCPQNYGHSY SGTVTLTQAL TRSINVVPVK LSIALGKGAK
NPAKAGRAKI IEVARKFGIV TPLPDTPSLP IGADEVNVLE HAVAYATFPN KGKAVTPHAV
LEVRTGAGDL VWRYDRDGPE PRQIIPPSVA ADMAGMMSHV VSEGTARRAI LDGIPAAGKT
GTTNAYRDAW FVGYTGNFAC GVWYGNDDYS PTNRLTGGAL PAQTWHDIMT AAHRGIEIKD
IPGVATPAKP TAAMTARTAA SQDNATPAPP PILTRRGADI LVRVEKMLDE AARTIGKTSA
GEPVNPARSD ATDPTSPRGE AKNVATASGD RAIPTPSKN