Gene Nwi_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1090 
Symbol 
ID3676427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1198649 
End bp1200673 
Gene Length2025 bp 
Protein Length674 aa 
Translation table11 
GC content68% 
IMG OID637712640 
Producthypothetical protein 
Protein accessionYP_317704 
Protein GI75675283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.521161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCG CTCACGTCTC ATCCGTCATC GGGATTGTCC TGCCCCTGCT TTGCACCCTT 
GCTGTTGGAA GCCTTGCTGT TGGAAGCCTT GCCGCACAAC AAATCGGCGA GCAGCCGCTT
TCCGACGGCA TCGCCGAGGC CGGCCCCGCC GCTCCGATCC CGGATCGGGC CGCCGGCGGA
ATGCAGATCT CATGGGAAGT CCGCAACCGT TTCCGACTGT TTCGCGAGGA GCGGGACTTC
CAGATCCATG CCGCCGCCGA AAGCAACCAA AGCATCCTCG CCGCCGAGCA GGCGTTTGAA
CGGCAAAGCG ACGGCCGCGG CTGGGCCCGC AACGCCGTGA ACCGTCTTTG CATCGATCTC
GGAGGCCACG TCAGCGAGCC CTGCACGCGC GACAATGTCA AGGAAAGCTA TCTGACACCG
ACAGAGCATC CGGTCACCGT GCGCCTCACC GGCGCTGTTC CGGTCGGCGC CGTCTGCGCC
TGGTCGTTCG ACGACGGCGA CAGCCCCCGC GGCACGACGC AGGACTGCAC TGAACCAATC
GACTTCCGCG CCCGCTACGG CCGCGCCACC AGCGCCACCG TCGATGTCAC GAGCGGCGAC
GCAACCCAGC GGCTGACGGC GCAGGTCAAG GTGCGCGATA TCCTGATCGC CGGCCTCGGC
GACTCCATCG CCTCCGGTGA AGGCAACCCG GATCGCGCCG TTCCGCTGTC GGACGAAGGC
TTCTGCTTTC GCTCCTATCT CGGCGGCGCG GGACGCGAAT TTTACCGGCC GAGCCGTGCC
GGCTACAAAG GCGGCCGGGC CTGCGGCACC TCCGGCTCGC TGCAGAGCTG GCAGCAATTC
GGCGCGCTGT GGATGAACGC GGCCTGCCAT CGCTCGCTCT ACAGCTACCA GACCCGCGCC
GCGCTCGCCC TCGCGGTGCG CTATCCGCAC GTCGCCGTGA CCTATCTGCC GCTCGCCTGC
ACCGGCGCCA GCATTCCCGA GGGGATTTTG GGGTCGCAAC GCGCGCGCGA ATGCCTGACC
GCGAAGTCGT CGGCCAAGTG CCAGGGCACC GTCAACGGCC AGATCGCCCA ACTGCGCGAC
GCGCTCGCGG CTGCGAGACA CCGCCAGCCC GAGCGCAAGC TCGATCTCGT GCTGATGACC
ATCGGCGCCA ACGACATCAA CTTCTCCGGC CTCGTATCCG ACGTCATCGT GGACGCGGCT
ACCGAGCGCG CGCTGTTCAG GCGCGGCGGC CTGATCGGAT CGGTCGACGG TTCGCGATCG
AGCCTCGAAC GCGACCTGCC GCAAGCCTTC ACCCGGCTGC GCGCCGCGTT GAGGCCGCTG
CTGGACAACG ACCTGTCCCG CGTCGTGTTC GTCTCCTATG CCAACCCGGC GCTGGCGAAC
GGCGGCGCGC CCTGCCCCGG CGGCAAGGCC GGCTTCGACG TGCATCCGTC GTTCAACGCC
GACTCCGGGC GACTTACGGC GGTCACGGAG TACGTCCGGA ACGAATTCCT GCCTGGGTTG
AAAGCGCTCG CGTCGTGCCA GTCCGGCGTG ATCTGCCGCG ATCCCGCCGG CGACCGCATG
ACCTTCGTCG ACGCGCATCA GTCGGCTTTC GCCAATCACG GATTTTGCGC GCGTGCGGAC
AGCGATCCCG AATTCGACCG CGAATGTTTC TCGGCGAAGG GGGACAGTTT CGTCGGCAGC
ATCGTGGAGG CCCCGCATCA GCCTCTCGTT TGCGGCCGCG GGGCGAGCGC GTTCCGCGCC
TATCTGCCGC GCGCGCGCTG GATCCGCGAC GCCAACGACA GCTACTTCAC GGCGATGACC
TACCCGCAAG CGCAGTCCTC ATTGATGCAG CCGTCCGACA TCCATGACGC GACATGGGGA
CTGCTCTCGG CGGTGTACGG CGGGGCCGTT CATCCGACCG CGGAGGGTCA TGCGGCGATG
GCGGACGCCG CGATGCCGGC AATCGCGTCG CAACTGCATC TCAACGCCGC CGACGCGGGC
GACGTGACGG GCGAGCCGCT GCCGCCGCCG ACCCCGCAGC AATAG
 
Protein sequence
MARAHVSSVI GIVLPLLCTL AVGSLAVGSL AAQQIGEQPL SDGIAEAGPA APIPDRAAGG 
MQISWEVRNR FRLFREERDF QIHAAAESNQ SILAAEQAFE RQSDGRGWAR NAVNRLCIDL
GGHVSEPCTR DNVKESYLTP TEHPVTVRLT GAVPVGAVCA WSFDDGDSPR GTTQDCTEPI
DFRARYGRAT SATVDVTSGD ATQRLTAQVK VRDILIAGLG DSIASGEGNP DRAVPLSDEG
FCFRSYLGGA GREFYRPSRA GYKGGRACGT SGSLQSWQQF GALWMNAACH RSLYSYQTRA
ALALAVRYPH VAVTYLPLAC TGASIPEGIL GSQRARECLT AKSSAKCQGT VNGQIAQLRD
ALAAARHRQP ERKLDLVLMT IGANDINFSG LVSDVIVDAA TERALFRRGG LIGSVDGSRS
SLERDLPQAF TRLRAALRPL LDNDLSRVVF VSYANPALAN GGAPCPGGKA GFDVHPSFNA
DSGRLTAVTE YVRNEFLPGL KALASCQSGV ICRDPAGDRM TFVDAHQSAF ANHGFCARAD
SDPEFDRECF SAKGDSFVGS IVEAPHQPLV CGRGASAFRA YLPRARWIRD ANDSYFTAMT
YPQAQSSLMQ PSDIHDATWG LLSAVYGGAV HPTAEGHAAM ADAAMPAIAS QLHLNAADAG
DVTGEPLPPP TPQQ