Gene Nwi_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1078 
Symbol 
ID3674275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1181267 
End bp1182793 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content67% 
IMG OID637712628 
Productvirulence factor MVIN-like 
Protein accessionYP_317692 
Protein GI75675271 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.342174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGGGC GCATTTTCAC CGTCGGCGGA TATACGTTGC TCTCGCGGCT CACGGGGTTT 
GCGCGCGACA TCATGCTCGC GGCGATTCTT GGCGCGGGGC CGGTCGCGGA TGCTTTCTTC
GTGGCGCTGC GATTGCCCAA TCATTTCCGG GCGATTTTCG CAGAAGGCGC TTTCAACGCC
GCGTTCGTGC CCGCTTACGC GCATGTCTCC GGCGGTGGCC CGGCTTCAGC GAAACTGTTC
GCCAGCCGCA TCTTCACGCT GCTGTTGCTG TCGCAGATGG TCCTGCTGGC GATCGCCTGG
CTGTTCATGC CGCAGGTCAT AGCGCTGCTC GCGCCCGGTT TCGTTGATGA CCCGGCTCGC
GGCGAACTCG CCGTTTCGCT GACGCGGATC ACCTTTCCCT ATCTGCTGCT GATCACGCTG
GTGACGCTGT ATGGCGGGAT GCTGAACGTC ATGCACCGCT TCGCCAGTGC TGCGGCCGCT
CCGATCCTGC TCAACCTGTC GATGATGATG GCCTTGGCGC TGGCGGCCTT CTTTCCGAGC
GCCGGGCACG CGGCGGCCTG GGGTGTGCTG CTCTCCGGGG TCCTGCAATA TTTTCTGCTG
GCGGCCGACG CCGCGCGTCA CGGCCTGATG CCCCGGCTGA CGCGTCCGAC GCTCGACGCC
GACGTGCGCG GTTTCTTTCG CGCGCTCGGG CCCGCGACCG TCGGCTCCAT GGGAACGCAA
CTGGCGATGT TCGCCGATAC CATCATCGCC ACCTTTCTCC CGGTCGGCGC CTTGTCGGCG
CTGTATTATG CCGACCGGTT GAATCAACTG CCGGTCGGGG TGATCGGCAT CGCCATCGGC
ACCGTGCTGC TGCCGGAAAT GTCGCGGCGG ATCACGGGCG GCGATCTTGC GGGCGCGATG
GCGTCGCAGC GCCGGGCGTT CGAATTCTCG CTGCTGTTCT CGATCCCGTT CATTGCGGCG
TTTCTCACCG TGCCTGATGT CATCATGCGG GCGATGTTCG CGCGCGGCGC TTTTTCCGCG
GCGGATGCGG CGGCCGCCGG CGCGACGCTC GCCGCCTACG CCGTCGGTCT CATCCCCTTC
GTTCTGATCC GGAGCGCGGT GGCTGCGTTC TACGCGCGCA AGAATACCGC GACGCCGGTG
AAGGCCTCGC TTGCCGGGCT CGGGGTCAAT CTCGTGCTCA AGGTGGCTCT GATGGGCTCG
CTGGCGCAGG TCGGCCTGGC GCTCGCCACG GCGGCGGGCG CCTGGATCAA CCTGCTGCTC
GTGCTCGGTT TTGCGGCACG GGCGGGTTAC ATCGAGATCC GCCGCCCGCT GCTGATCTCG
CTCGGCAGGT TCCTGATCGC GGGCGCGCTG CTCGCAGCGG CGCTGTGGTT GACGGCGCAC
TTCGCCTCCG GGCAATTTGC GCATTGGAGC GTGATGCGCG ACGAAGCGGC GCTCGGGGTG
CTGATCGTGG TCGGAGCCAT CGTTTACGCC GGTACGATCC TGCTGCTGTT CGGCCCGCGC
TGGCTGAAAT CGCTGGTGCG GGGCTAG
 
Protein sequence
MLGRIFTVGG YTLLSRLTGF ARDIMLAAIL GAGPVADAFF VALRLPNHFR AIFAEGAFNA 
AFVPAYAHVS GGGPASAKLF ASRIFTLLLL SQMVLLAIAW LFMPQVIALL APGFVDDPAR
GELAVSLTRI TFPYLLLITL VTLYGGMLNV MHRFASAAAA PILLNLSMMM ALALAAFFPS
AGHAAAWGVL LSGVLQYFLL AADAARHGLM PRLTRPTLDA DVRGFFRALG PATVGSMGTQ
LAMFADTIIA TFLPVGALSA LYYADRLNQL PVGVIGIAIG TVLLPEMSRR ITGGDLAGAM
ASQRRAFEFS LLFSIPFIAA FLTVPDVIMR AMFARGAFSA ADAAAAGATL AAYAVGLIPF
VLIRSAVAAF YARKNTATPV KASLAGLGVN LVLKVALMGS LAQVGLALAT AAGAWINLLL
VLGFAARAGY IEIRRPLLIS LGRFLIAGAL LAAALWLTAH FASGQFAHWS VMRDEAALGV
LIVVGAIVYA GTILLLFGPR WLKSLVRG