Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1071 |
Symbol | |
ID | 3674268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 1171471 |
End bp | 1172937 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637712621 |
Product | cytidyltransferase-related, RfaE bifunctional protein |
Protein accession | YP_317685 |
Protein GI | 75675264 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain [TIGR02198] rfaE bifunctional protein, domain I [TIGR02199] rfaE bifunctional protein, domain II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0136639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.217444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGATT TTGACGGCTT GTCTAATGCG TTTTCCGGCC AGACGGTGCT CTGTGTCGGC GACCTGATGC TCGACGAGTT CGTGTACGGC GAAATTTCGC GGATTTCGCC GGAGGCTCCG GCCCCGGTCA TCGCGGTTCA GCGAAGCGAA ACCAACGTCG GCGGGGCCGG CAATGTGGCG CGCAACATCG CCGCGCTCGG CGCGCGCTGC ATCTTCGTCG GATTGGCCGG AGAGGATGAC GCGGGCGCGA GGCTGCGGGA CACGCTTTCG CGGGAACGCC TGATCGAGCC GTTGTTGATT TCAGATCCGG CGCGCTCGAC GACGCGCAAG GTGCGTTTCG TTTCGGAGCA TTTTTCGACC CACATGCTGC GCGCGGATTG GGAAACGCTT GCTCCGGCGT CGGGGGAGGT GGAGCAGGCC CTGATCGATG CGATTCTGCC GCAACTGCCA TGCGCCGACA TCGTATTGTT GTCCGACTAT GCCAAGGGAG TGCTGACCAC GCGGGTGATC CGCAGCGTCA TCGACGGCGC GCGCCGGTTG GGCAAGCGCG TGATCGTCGA TCCGAAGAGC GCCGATTTCG GCATCTATCG CGGCGCGACG CTCCTCACGC CAAACAGCAA GGAATTCACG GACGCAACCG GTCGCCGCGC GGATGATCAG GCAAGCCTTG CGAAGGCTGC GCGAGACCTG ATGCGGATCG CGGAATGCGA AGCCTTGCTG GTGACGCAAA GCGAGCGCGG CATGACGCTC GTGCCGGGCG AGGGCGAGGT CATTCATGTT CCCGCTCACA CCGTCAAGGT CCGCGATGTG ACGGGCGCCG GCGACACCGT CGTCGCCACG CTCGCGGTTT CGCTCGCGGC GGGCGCGGAC TGGGAAGCCG CGTTGCGGAC GGCGAGCGCG GCGGCCGCCG TCGCTGTCGC CAAGAGTGGC ACCGCGATCG TCACGCTCGC GGAACTGCGC CGCAATATCC TGCCGCCGGC CTCCCTGGCC GCCGAGGAGA AGATCGCGCG ATCGGCAGGC GACCTTGATC AACACCTGAC GGCATGGCGT GAACAGGGTC TGCGGATCGG CTTCACCAAT GGCTGCTTCG ATATCCTGCA TCCCGGCCAC GTCAAGGTGC TGACCGGCGC GCGGGCTGCG TGCGATCGGC TGATTGTCGG ATTGAACAGC GATGCGTCCG TGAAGCGGCT GAAGGGCGAG GGCCGTCCGA TCCAGAACGA GCGCGCGCGC GCGGAAGTGC TTGCCGCGCT CGAAGCCGTC GATCTCGTCG CGATCTTCGA GGAAGACACG CCGCTGAACC TGATCGGGCG AATCCAGCCG AACGTGCTCG TCAAGGGCGG GGATTATTCT CTTGAGCAAG TCGTCGGTCA GGAGCTAGTG ACTGCACGAG GCGGCGAGGT TATTCTGATC GACATCCTGC AAGGATTCAG CACGACATCG CTGGTGAAGC GCGCCGGAGG GGCATGA
|
Protein sequence | MIDFDGLSNA FSGQTVLCVG DLMLDEFVYG EISRISPEAP APVIAVQRSE TNVGGAGNVA RNIAALGARC IFVGLAGEDD AGARLRDTLS RERLIEPLLI SDPARSTTRK VRFVSEHFST HMLRADWETL APASGEVEQA LIDAILPQLP CADIVLLSDY AKGVLTTRVI RSVIDGARRL GKRVIVDPKS ADFGIYRGAT LLTPNSKEFT DATGRRADDQ ASLAKAARDL MRIAECEALL VTQSERGMTL VPGEGEVIHV PAHTVKVRDV TGAGDTVVAT LAVSLAAGAD WEAALRTASA AAAVAVAKSG TAIVTLAELR RNILPPASLA AEEKIARSAG DLDQHLTAWR EQGLRIGFTN GCFDILHPGH VKVLTGARAA CDRLIVGLNS DASVKRLKGE GRPIQNERAR AEVLAALEAV DLVAIFEEDT PLNLIGRIQP NVLVKGGDYS LEQVVGQELV TARGGEVILI DILQGFSTTS LVKRAGGA
|
| |